Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_2217 |
Symbol | |
ID | 5612874 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | + |
Start bp | 2675401 |
End bp | 2675586 |
Gene Length | 186 bp |
Protein Length | 61 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640933121 |
Product | cytochrome oxidase maturation protein, cbb3-type |
Protein accession | YP_001473954 |
Protein GI | 157375354 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3197] Uncharacterized protein, possibly involved in nitrogen fixation |
TIGRFAM ID | [TIGR00847] cytochrome oxidase maturation protein, cbb3-type |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTATCA TCTATGTGTT GATCCCGATA GCCATGTTAT TTGTTCTTAT CGCGATTGGG ATCTTTTTTT GGGCTGTAAA ATCTGAACAG TTCGATGATC TTGACAGGCA GAGTGTATCA ATCCTATTTG ACGAAGATGA AAAACCGACT CCAAAAGCTA ACGATAATGA GTCAACGCCC TCTTGA
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Protein sequence | MSIIYVLIPI AMLFVLIAIG IFFWAVKSEQ FDDLDRQSVS ILFDEDEKPT PKANDNESTP S
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