| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2211 |
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| Symbol | |
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| ID | 5613120 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 2669201 |
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| End bp | 2670628 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640933115 |
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| Product | cbb3-type cytochrome c oxidase subunit I |
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| Protein accession | YP_001473948 |
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| Protein GI | 157375348 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3278] Cbb3-type cytochrome oxidase, subunit 1 |
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| TIGRFAM ID | [TIGR00780] cytochrome c oxidase, cbb3-type, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAACC ATTCCCAGCC ACAAGGCGCT GATTACAATT ACACCGTTGT CCGCCAGTTT
GCCCTCACAA CAGTTTTGTG GGGAATTATT GGTATGTCAG TGGGTGTATT GATCGCGGCT
CAGTTGATCT GGCCACAACT AAACTTCGAT ACTCCTTGGC TTACTTACAG TCGTCTTAGA
CCTCTGCATA CTAATGCCGT GATTTTCGCG TTTGGTACTT CAGCACTTTT TGCAACATCC
TACTATATCG TTCAACGCAC GTGTCAAACC CGACTTTTTG CACCCAAATT GGCTGCATTT
ACATTCTGGG GTTGGCAAGC CATTATTCTT TCAGCAGTAC TGACTCTGCC TCTGGGTATC
ACCAGTGGTA AAGAATATGC TGAACTTGAA TGGCCTATCG ACATCGCGAT CACCATAGTG
TGGGTCACGT ACGCGATAGT TTTCTTCGGT ACTATTGTTA AACGAACGAC TTCCCATATT
TATGTGGCGA ACTGGTTCTT CGGTGCCTTT ATTATCACTG TCGCTGTATT GCACATAGTT
AACTCTATGG CTGTACCCGT CAGCTTATGG AAGTCTTACT CTCTGTATGC CGGTGCGGTC
GATGCAATGG TTCAGTGGTG GTACGGTCAC AATGCCGTAG GCTTCCTGCT TACCGCCGGC
TTCTTAGGTA TGATGTATTA CTTTGTACCT AAACAAGCGG GTCGTCCGGT TTACTCATAC
CGTCTGTCTA TCGTTCACTT CTGGGCACTG ATTGCTCTGT ATATCTGGGC TGGTCCTCAC
CACCTACACT ATACGGCGCT GCCGGATTGG ACTCAGTCGT TGGGTATGGT GATGTCACTT
ATCTTATTCG CTCCTTCTTG GGGTGGTATG ATTAACGGTA TCATGACCCT GTCAGGTGCT
TGGCATAAAC TAAGAACCGA TCCTGTATTA CGTTTCCTTG TTGTTTCATT GTCTTTCTAC
GGTATGTCTA CCTTCGAAGG CCCAATGATG GCAATCAAGA CCGTAAACGC CCTATCTCAC
TACACTGACT GGACCGTTGG TCACGTTCAC TCTGGTGCGC TAGGTTGGGT TGCGATGGTC
TCTATTGGTT CGCTTTATCA CCTAATCCCT GTGCTTTACG GACATGGTCG TATGTATAGC
TCTAACCTAG TTAATGTTCA TTTCTGGTTA GCGACTATCG GTACAGTTCT ATATATCGTA
TCTATGTGGA TCTCTGGTGT GATGCAAGGT CTGATGTGGC GTGCAGTTAA CTCTGACGGT
ACTCTGACTT ATAGCTTCGT TGAAAGTATT GAAGCTTCAT ACCCATTCTA CTTTGTTCGA
TTCCTTGGTG GCTGTTTCTT TGTAACCGGT ATGCTTCTAA TGGCATATAA CGTGTTTAAG
ACAGTAAAAG CGCCTAAAGA ATCTTTGCCT GCATTAGCAG AAGCATAA
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| Protein sequence | MMNHSQPQGA DYNYTVVRQF ALTTVLWGII GMSVGVLIAA QLIWPQLNFD TPWLTYSRLR
PLHTNAVIFA FGTSALFATS YYIVQRTCQT RLFAPKLAAF TFWGWQAIIL SAVLTLPLGI
TSGKEYAELE WPIDIAITIV WVTYAIVFFG TIVKRTTSHI YVANWFFGAF IITVAVLHIV
NSMAVPVSLW KSYSLYAGAV DAMVQWWYGH NAVGFLLTAG FLGMMYYFVP KQAGRPVYSY
RLSIVHFWAL IALYIWAGPH HLHYTALPDW TQSLGMVMSL ILFAPSWGGM INGIMTLSGA
WHKLRTDPVL RFLVVSLSFY GMSTFEGPMM AIKTVNALSH YTDWTVGHVH SGALGWVAMV
SIGSLYHLIP VLYGHGRMYS SNLVNVHFWL ATIGTVLYIV SMWISGVMQG LMWRAVNSDG
TLTYSFVESI EASYPFYFVR FLGGCFFVTG MLLMAYNVFK TVKAPKESLP ALAEA
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