| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2184 |
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| Symbol | |
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| ID | 5613380 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2641354 |
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| End bp | 2643117 |
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| Gene Length | 1764 bp |
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| Protein Length | 587 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640933088 |
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| Product | hypothetical protein |
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| Protein accession | YP_001473921 |
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| Protein GI | 157375321 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.287741 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAAAA CTAAAGTATC AGGATATATA GGCTTACTTG CCTTAATCCT TGCTCTTCCG
GTTAGCGCCG GTAAACCTGT AGACAATGAT GGAGATGGTT ACAAATCGAG TTTAGATTGT
AACGATAACA ACTCATTGGT CTGGGAGCTC AACTCATGTG GCGTCTGTGA CGTCGAACCC
GTTAATGGCT GTAATGCTTC TAACCCACAC TCAGATCTGA GTTGGACCGA CTACCCAAAT
GCTTGTATAA ACTGTCACGA CGGTGGGGTT GGTGGTTCTC AGTATGATGA GATGTTTGGC
TCTACTCACT ATCAATGGAC GGGTGATACA CCTGACATGG TAAACCAGGG TGGTACCCTA
CAGGGTAAGC TTACCAACGC AGTAAACAGC TATTGCATCA ACATCGAAGG TGACTGGCCG
GTTTGTGGTT CATGTCATGC TGGCCGCGGT ATTAAGCCTG GCGAAGGTGA TACCAACGCC
AATGTCGATT GTTTGATGTG TCATAACAAA GACTACGCCC TAAACCGTGT AAGAAAACCA
GACGGTAGCA TGGGTCCATC AGATGGTACT GCACAGGTCG ATCTGGATAG TTACGTTCAG
AACATCGCGG CCCCTGGCAG AACTAACTGT CTTAAGTGTC ATGCCTACGC CGGTGGTGGT
GATGGTGTGA AGCGCGGCGA TATATCTTCG GCCTTAATGG CGAACTCAGA CATGCATTTC
GATGTTCATA TGAATGTCGC CGGTGCTAAC CTGGAGTGTC AGGATTGCCA CAAGTTTGAT
AGCCATAGAG TGATAGGTAA AGGCTCAGAT CTGCGCCCTA CCGATGATAT AGTCAGAGGC
GCTGAGGTGA CATGTAGCAG TGGTACCTGT CACGTCGGAA TGGACTCTGG TTCAGGACAT
GCAAGCTCTG GACGTCGTGA TGAGCCCGAT CGTCATGTGG CAAGAGTTTC ATGTCAATCC
TGTCACATTC CAACCTATGC AAAAGATCTT GGTGACCCTT CACATGTACC TACAGAGATG
CACAGAGATT GGCGTTTCCA TCATGATGGT ACACCAGCCG ATGGTGTTTC CGGTGCTGGT
CACCCCCATG CCGATAAATT GGCAAACCAG ACTCCGGAGA TGAGATTCTG GAATCGTAAG
AGTGATAACT ACCTGCTGCA TGATCTGGGT ATTGTGGATC CCGCCACCGG ACGCTATCCG
ACTTCTCGTC CTATAGGTGA TGTATCGGAT GGTAAGTTAA TGCCATTCAA GTACAAGACA
GCGACTCAGC CAATGACGGT TGCCGACGAC CGTATGATTG CACTCGATAC CTTCGAATAT
ATCAAAGGTT CCGGTGACGC AGTTGCAGCT ATCGAGGCTG GTCTGGTTAA CATGGGCTAC
CCTGTGAATG AACCATACAA GTGGATAGAA ACCGATACTT ATCAGGTGAT AAACCATGGT
GTTAACCCGG CAAGTGATGT TGCGGCTTGT AGTCAGTGCC ATGAAGAAAA TCTTGATTTA
ACTACTGACT CTAAGCTCGA TGCCTTAGGG TACAAACTCA AAGGACCTAA AGAGCAAGTG
TGTGCTCAGT GCCATGATGG CAGTAAAAAC TTACCGCGCA CCTGGGATAG AATGCACAAT
CATGTCGAGA AAGGCAGCGC TGGTATAGGT TGTAATTTCT GTCACGATGT TGAACGTGTC
GAGCGTAACC TATGTGATCC TTGCGATTCC AGTTGCTCCA TCGAATATGT GGATAACATC
TCCTATCCAC ATCAGTGTAA CTAA
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| Protein sequence | MSKTKVSGYI GLLALILALP VSAGKPVDND GDGYKSSLDC NDNNSLVWEL NSCGVCDVEP
VNGCNASNPH SDLSWTDYPN ACINCHDGGV GGSQYDEMFG STHYQWTGDT PDMVNQGGTL
QGKLTNAVNS YCINIEGDWP VCGSCHAGRG IKPGEGDTNA NVDCLMCHNK DYALNRVRKP
DGSMGPSDGT AQVDLDSYVQ NIAAPGRTNC LKCHAYAGGG DGVKRGDISS ALMANSDMHF
DVHMNVAGAN LECQDCHKFD SHRVIGKGSD LRPTDDIVRG AEVTCSSGTC HVGMDSGSGH
ASSGRRDEPD RHVARVSCQS CHIPTYAKDL GDPSHVPTEM HRDWRFHHDG TPADGVSGAG
HPHADKLANQ TPEMRFWNRK SDNYLLHDLG IVDPATGRYP TSRPIGDVSD GKLMPFKYKT
ATQPMTVADD RMIALDTFEY IKGSGDAVAA IEAGLVNMGY PVNEPYKWIE TDTYQVINHG
VNPASDVAAC SQCHEENLDL TTDSKLDALG YKLKGPKEQV CAQCHDGSKN LPRTWDRMHN
HVEKGSAGIG CNFCHDVERV ERNLCDPCDS SCSIEYVDNI SYPHQCN
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