| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2181 |
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| Symbol | |
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| ID | 5613377 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2638620 |
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| End bp | 2639213 |
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| Gene Length | 594 bp |
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| Protein Length | 197 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640933085 |
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| Product | hypothetical protein |
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| Protein accession | YP_001473918 |
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| Protein GI | 157375318 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.498275 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACGATAG TTTGGACCAC TATACGTGTC GGGATCTCGC CGATGCCCAG TTCGACAAAA
GCGTATAGAG CCATGATCAA ACTAACCGAA CACACAGGCG ATGGCCCCAT TTATGATCTT
GGTTCGGGCT GGGGAAGCTT AGTCATCCGT ATGGCGACCA AATTTCCTAA GCGTCAGGTT
GTCGGCTACG AACTCTCTCT GTTACCTTAT CTGGTGAGTT TATCGGTTAA GCGGCTAATG
AGGTTAGATA ACTTGAATCT GTATCGGCAA GATTTTATGA AGGCCGATCT ATCCGGGGCA
TCGGTGCTGC TTTGCTACCT TTATCCTGAT GGCATGTCAA AGTTAGATCT CCTTATCGAT
ACACAATCGA AAAAAGATTT ATGTACATCA ACGTCCAGTC TCAGTAAGGT CAACTCCAAG
CATTTATTTA GTGACACTCC CCATTTTCAC TGTGGATGTA ACCCCGACTT TGTCATCAGT
AATAACTTCG CGCTTCCATC TCGAAAGGCC GAAAAAGAGG TCCGTTTAGA CGACCTTTAT
CGCTCGCCCA TTTTTCGCTA TAAATTGGAC CAATCTGTTA ACCGCATAAG TTAA
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| Protein sequence | MTIVWTTIRV GISPMPSSTK AYRAMIKLTE HTGDGPIYDL GSGWGSLVIR MATKFPKRQV
VGYELSLLPY LVSLSVKRLM RLDNLNLYRQ DFMKADLSGA SVLLCYLYPD GMSKLDLLID
TQSKKDLCTS TSSLSKVNSK HLFSDTPHFH CGCNPDFVIS NNFALPSRKA EKEVRLDDLY
RSPIFRYKLD QSVNRIS
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