| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2179 |
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| Symbol | |
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| ID | 5613804 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 2635321 |
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| End bp | 2635761 |
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| Gene Length | 441 bp |
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| Protein Length | 146 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640933083 |
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| Product | universal stress protein |
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| Protein accession | YP_001473916 |
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| Protein GI | 157375316 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATAAAT GTCTATATCT TGTGGGTGTG GATGGTAGCG AGTGGGGCGA TAGGGCAACG
GAGCGAGCCG TGCATTTAGC TAAGCAAACC GGCGCACAGG TAAAGCTGGT TTATGTCCTG
AGTTGGCCGG CAGTACAACC TATGATGGTA GAAGAGGTGG CTCCACCCAT TATTTTAGAC
CAAGACGAAG AGGAAAAGCA GGTCACAAAG AATGTACTCG AGCCACTCAA ACGAAAATAC
AGTGGAGCAG ATGTACCGAT AACGACGGAG TTGGTATGGG GCGATCCTGC ACTGGTGCTG
CATGATTGCG CAAAGGAGGA GCGCGCCAAT ATGCTCTTTG TCGGTCGTCG AGGTCGTTCT
CGTTTCGCCG ACCTGATCCT TGGGAGTGTG GCCAATAAAT TAGCGCACTG TATCGGTATT
CCGCTGGTAT TAGTCCCTTA A
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| Protein sequence | MNKCLYLVGV DGSEWGDRAT ERAVHLAKQT GAQVKLVYVL SWPAVQPMMV EEVAPPIILD
QDEEEKQVTK NVLEPLKRKY SGADVPITTE LVWGDPALVL HDCAKEERAN MLFVGRRGRS
RFADLILGSV ANKLAHCIGI PLVLVP
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