| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2177 |
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| Symbol | |
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| ID | 5613802 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 2633705 |
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| End bp | 2634838 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640933081 |
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| Product | dehydrogenase catalytic domain-containing protein |
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| Protein accession | YP_001473914 |
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| Protein GI | 157375314 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.932775 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCTCCC TGGGGGCCGA TATGACAGAG GGGATGCTGG TTGAATGGCT GGTTAAGCGC
GGAGACCCGG TAAAGCGAGG CGATATTATC GCAGTCATCG AAACACAGAA AGGTGCGATC
GATATGGAGG TGTACCACAC CGGCGTCATC AGTGAAATAT TACACCAACC TGTCGTTACG
CTGCCTGTCG GGACGGTTAT GGCGAGAGTT GAAACTCAAG CCAGTGACAG GGAGGTTGCA
GCGACAATAG CTCCGCAGAT TGATACAGTC GCTCCACAGA TAGATACAGC AGCGGACCGC
GTTGCAGCAA TAGCCTCACC AATCGTTCGT AAAATTGCAA TGGGGAAGAG TCTCGATTTG
ACAGCCATTA AGGGCAGTGG ACCCAAGGGG GCCATTTTAT TGAGGGACTT GCCGGAAAAC
ACTGAGGAGA TACGGGCTAG CACATCAGAC CGTAAGCAGA GCAGTGGTAT AACTAAGAGC
ATGCGCGCAG CCATCGCCGC CGCGATGAGC AAATCAAAAA ACGAGATCCC CCATTTTTAT
CAAAGCTTAG ATATCGAACT GGGCAATGCA CAGGAGTGGC TAAAGAAAAC CAATGAAGAT
AGAGCACCTG AGCAGCATAT ATTACTTTTG GCCCTGTTAT TAAAAGCCGT GGCTAAGACA
CTGACGAAAT ACCCGGATTT AAATGGCTTT TATCAAGAGA ATCAATTTGT ACATGCAAAA
GAGATCCATA TAGGTAACGT GATCAGCATA CGTCAGGGGG GATTAGTCGT TCCGGCGATC
CATCATGTCG ATAAACTCTC GGTTGATGAA ACCATGCAGG CCATCCGCGA CATATCCGCA
AGGGGCCGTA ACGGGCACCT GCGTAGCTCT GAGTTAACCG ATGCGACCAT TACCATAACG
AATATGGGTG AACGTGGAAC CGATACCGTA TTTGCTGTTA TCTATCCTCC ACAAGTGGCC
ATTATTGGTT TTGGCAAGAT AAGAGAGACA CTGCAACTTG TCGACGCTAT TCTTGTAAGC
CGCGATGTAA TGAGTGTGTG TCTGAGTGCC GATCATCGGG TTATCGATGG CATGTTAGGG
GCAAAATTCC TTAATGCTTT GTCAAAACAA CTGCAGAAGC CGGAGCTGTT ATGA
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| Protein sequence | MPSLGADMTE GMLVEWLVKR GDPVKRGDII AVIETQKGAI DMEVYHTGVI SEILHQPVVT
LPVGTVMARV ETQASDREVA ATIAPQIDTV APQIDTAADR VAAIASPIVR KIAMGKSLDL
TAIKGSGPKG AILLRDLPEN TEEIRASTSD RKQSSGITKS MRAAIAAAMS KSKNEIPHFY
QSLDIELGNA QEWLKKTNED RAPEQHILLL ALLLKAVAKT LTKYPDLNGF YQENQFVHAK
EIHIGNVISI RQGGLVVPAI HHVDKLSVDE TMQAIRDISA RGRNGHLRSS ELTDATITIT
NMGERGTDTV FAVIYPPQVA IIGFGKIRET LQLVDAILVS RDVMSVCLSA DHRVIDGMLG
AKFLNALSKQ LQKPELL
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