| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2172 |
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| Symbol | |
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| ID | 5610835 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2628167 |
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| End bp | 2628592 |
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| Gene Length | 426 bp |
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| Protein Length | 141 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640933076 |
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| Product | SOS-response transcriptional repressor LexA -like protein |
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| Protein accession | YP_001473909 |
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| Protein GI | 157375309 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAGTGA TCCCAATCTC AGCCTGCGCC GGTATTACCG GATTCGAGAG TCCGGCAGCA
GATTATAAGC AGCTACCGCT GAGCCTGGAT GAACTGCTTG TCGAACATCC CAGCGCCACT
TTTATCGGCC AGGCCAGCGG CAACTCGATG CAGAATATCG GTATATTCGA TGGGGATATT
CTTATCGTAG ACAGGCATGT CTCCGTTAAA AATCAAGATG TGATCGTCGC TAATTATAAT
GGCTGTTTTG TCTGCAAAAT TATTGATACC TACAGGCGGT TATTACTGTC AGCCAGCGAT
GAACACCTGC CGGTGACCAT ACATGAGTAT GATCAGTTTA GCGTTGAGGG CGTTGTTGTA
CGGTCGATAC GGTGCCACCG CCCAAGTCCT CTGCTGACAA AAGGTACAGG TCAGGTTGAG
AGTTGA
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| Protein sequence | MKVIPISACA GITGFESPAA DYKQLPLSLD ELLVEHPSAT FIGQASGNSM QNIGIFDGDI
LIVDRHVSVK NQDVIVANYN GCFVCKIIDT YRRLLLSASD EHLPVTIHEY DQFSVEGVVV
RSIRCHRPSP LLTKGTGQVE S
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