| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2171 |
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| Symbol | |
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| ID | 5610834 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2626778 |
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| End bp | 2628031 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640933075 |
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| Product | DNA-directed DNA polymerase |
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| Protein accession | YP_001473908 |
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| Protein GI | 157375308 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTGCTT TGGTCGATGC CAACTCCTTT TACTGCTCCG CCGAGCAGGT ATTTCGTCCC
GAATGGCGCG GTCGCCCGAT TGTGGTTCTG TCGAACAACG ATGGATGTAT CGTAGCGGCG
AATCGTCAGG CCGTTGATGC CGGGATCCCC AAGTTCGAGC CCTTTTTCAA GGTTAAGTCA
CAATGTGAGC GGTTGGGCGT GATTGCACTC AGTTCAAACT ATGAACTCTA CGGCTCGTTG
TCGGCCAGTA TGATGGAGGT CATAGGCCGC TTTGCGCCCG AACAGCATAT CTACAGCATC
GATGAATCCT TTCTCTCCTT TAAACACTGC TCTACGGCGA TCCCCTGTTT AATTAAGCAT
GGTGAGGCCT TGAGGCGTGC CGTCTGGAAA GAGACCCGCT TACCGGTGTG CGTTGGCATG
GCAGAGACGC TCACCCTGGC CAAGATTGCT AATCATGCCG CAAAGAAACA TGAGGGATAT
CATGGTGTCT GCCTAATCGA CAATCCACAG CAACGTAAAG CGATCTTACT TAAAATGCTC
CCGGGAGATG TATGGGGGAT CGGGCGCCGC TTGGCTAAGC GCCTGGATAT GATGGGCATC
AAGACCGCCT ATGCCCTGTC TCAAATGGCG CCCGGGATTG CCAGAAAGCA ATTCAGCATT
GAGGTCGAAC GCACCGTCCG TGAGCTCAAT GGCGAAGCCT GCAAAGGCTG GGACGAGGCC
CGCGCAGATA AGCAGCAGAT ATTTTCCACA CGTAGCATGG GTGAGCGGAT AGTCGATGCC
ACCTCACTGC AACAGGCATT AAGTAAACAT GCGGGAATAG CCACCAGCAA GGCAAGAGAG
CAAGGCTCAC TGTGTTCGGT AATACATATT TTTGCATCGA ACTCCCCCTT CGATGAACAC
CCGACTGGCT TTAAAATCAC CCACCGTTTT GCTTATCCTA CTAACGATAC CGGCGAGATC
ACCGAGGTGG TCAACCGCAT AGCCGCACGG CAATTTCGAG AAGGGGTCCG CTACTACAAG
GTGGGTGTAG GCTTGATCGA TCTGGTCAGC GAAGCACATC TGCAGGGGGA TCTGTTTGAG
CCTCCTAAAA ACCCCGCATT AATGCGGGTG TACGATAGGC TTAACCATAG GTATGGCTCA
GACTCACTCT TTATGGCTGC CCAGGGGATC ACCCCGAAAT GGAGCATGCG CAGACAATAC
CTTAGCCCCC AATACACCAC ATGCTGGAAG GATCTGCCTA AGATACAGTG CTAG
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| Protein sequence | MFALVDANSF YCSAEQVFRP EWRGRPIVVL SNNDGCIVAA NRQAVDAGIP KFEPFFKVKS
QCERLGVIAL SSNYELYGSL SASMMEVIGR FAPEQHIYSI DESFLSFKHC STAIPCLIKH
GEALRRAVWK ETRLPVCVGM AETLTLAKIA NHAAKKHEGY HGVCLIDNPQ QRKAILLKML
PGDVWGIGRR LAKRLDMMGI KTAYALSQMA PGIARKQFSI EVERTVRELN GEACKGWDEA
RADKQQIFST RSMGERIVDA TSLQQALSKH AGIATSKARE QGSLCSVIHI FASNSPFDEH
PTGFKITHRF AYPTNDTGEI TEVVNRIAAR QFREGVRYYK VGVGLIDLVS EAHLQGDLFE
PPKNPALMRV YDRLNHRYGS DSLFMAAQGI TPKWSMRRQY LSPQYTTCWK DLPKIQC
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