| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2168 |
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| Symbol | |
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| ID | 5610973 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2624216 |
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| End bp | 2625214 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640933072 |
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| Product | hypothetical protein |
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| Protein accession | YP_001473905 |
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| Protein GI | 157375305 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACCA ATACAGCACT CTTATTGTTA TCCTCACTGC TACTGGTTAG CGCATGCGGA
AGTGATAGCT CCGATCCTGA AAAAGAAACG GTGTTGCCAA CAGCGAAGTT ATCATTAGCT
ATCTCCGACT CCCCCATGTC TGGCGTTTCA CGTTTAGGCA TGGTCTTGAA TGAGCTGGTG
ATGACCGATG CAGCAGGAGT CGTACACAGG CACGACCTGC AAGATATGAC ATTTAACCTG
CTCGATTATC AGGGTATGGA CAGCCATATG GTGGTCTCGG GCATTGATCT GCCTCAGGGT
GATTATCACG ATGCCTATAT TACAGTTCAT CAGGGTGATG GTAATCAGGG GTGTTACATA
GAGGACGGCC AGGGGCGCCA CGGTCTGCAT GTGACAGATG GACACTTACC GGTCCGTGAT
TTCGAACTGG TCGCAGGGCA GCATCTTTCA CTCACAATGG AGATCGACCT CTATCGCGGG
CTTTCCTACC ATCAAGGCCA ATATGAATTA AATCATCAAG GGATGTGGAG TGTAGACAAT
CGCTATATGG GTCACTTGAT AGGAGAAGTC GATCCACAAT GGATAGCCGA CTGCGAAACA
ACATACTCAG GTTTAGTTCC AACTGGCGGA CAATTTACCC ATTTAGCCTA CCTCTACCCT
AATACAGTCA CTGATATAGG TCAGATGGCA GACATGGGAA CGACGCCACC AAGTGGACTT
ACAGCACCTT CGGCGGTAAG TCCTATGATG CAGGATATTA ACGGTAACTG GCACTTCGCC
ATGGGATACC TGCCTGCAGG TGAATACAGA GTGGGTTATA CCTGCTTAGG GCACCTGGAT
GATCCAATAG CCGACGATAT CAGTAGCGGC CCATTTGTGA TATTTAAGGA TTCTGGTTCT
ATCTCCATAG AGACAGGTTC TCAGGGGGGG CAACAGACAG TACATGAATG TGGAAGAGGC
AACGGTGGCC ACCATGGTGG TGGCAGACAC GGCGGATAA
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| Protein sequence | MKTNTALLLL SSLLLVSACG SDSSDPEKET VLPTAKLSLA ISDSPMSGVS RLGMVLNELV
MTDAAGVVHR HDLQDMTFNL LDYQGMDSHM VVSGIDLPQG DYHDAYITVH QGDGNQGCYI
EDGQGRHGLH VTDGHLPVRD FELVAGQHLS LTMEIDLYRG LSYHQGQYEL NHQGMWSVDN
RYMGHLIGEV DPQWIADCET TYSGLVPTGG QFTHLAYLYP NTVTDIGQMA DMGTTPPSGL
TAPSAVSPMM QDINGNWHFA MGYLPAGEYR VGYTCLGHLD DPIADDISSG PFVIFKDSGS
ISIETGSQGG QQTVHECGRG NGGHHGGGRH GG
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