Gene Ssed_2162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_2162 
Symbol 
ID5610003 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp2614437 
End bp2614964 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content52% 
IMG OID640933066 
Productcobalbumin biosynthesis enzyme 
Protein accessionYP_001473899 
Protein GI157375299 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2087] Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCAAT TAATTATCGG TGGTGCAAGG TCGGGTAAAA GCCGACTGGC ACAGGAATAT 
GCCAAAACCT GGCAGACTCG CACAAGCGGT GACGTCATCT TGGTTGCGAC GGCAGAAAGC
ACCGAAGGTG CCATGGCTAA GCGTATCGCT CACCATAAAA GCCACCGCCC ACAGGAGTGG
AAGGTCGTCG AGACAAGTTT AGATTTGGCC CAAATCCTGA TTGAAGAGAG CCGGAGCGAT
AACCTTATCT TAGTCGACTG TCTGACCCTG TGGCTGTCGA ACATACAGCT GAGTGACCGG
GTATGGAAAC AGGAGAAGCA GGCCTTATTG GACGTTGTGA ATGAGCTCCC CGGAGAGGTT
GTCTTTATCA GTAACGAGGT CGGTCAAGGT GTAGTCCCCT TGGGTGAGTT ATCACGTGAG
TTTGTCGATG AATCCGGTTG GTTACATCAA AGCCTGGCAA AACAGGTCGA CAGGGTCACG
ATGGCGATAG CCGGCTTACC TCTGGTGATT AAGTCGATGG AGGCATAA
 
Protein sequence
MKQLIIGGAR SGKSRLAQEY AKTWQTRTSG DVILVATAES TEGAMAKRIA HHKSHRPQEW 
KVVETSLDLA QILIEESRSD NLILVDCLTL WLSNIQLSDR VWKQEKQALL DVVNELPGEV
VFISNEVGQG VVPLGELSRE FVDESGWLHQ SLAKQVDRVT MAIAGLPLVI KSMEA