Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_2162 |
Symbol | |
ID | 5610003 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | - |
Start bp | 2614437 |
End bp | 2614964 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640933066 |
Product | cobalbumin biosynthesis enzyme |
Protein accession | YP_001473899 |
Protein GI | 157375299 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2087] Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCAAT TAATTATCGG TGGTGCAAGG TCGGGTAAAA GCCGACTGGC ACAGGAATAT GCCAAAACCT GGCAGACTCG CACAAGCGGT GACGTCATCT TGGTTGCGAC GGCAGAAAGC ACCGAAGGTG CCATGGCTAA GCGTATCGCT CACCATAAAA GCCACCGCCC ACAGGAGTGG AAGGTCGTCG AGACAAGTTT AGATTTGGCC CAAATCCTGA TTGAAGAGAG CCGGAGCGAT AACCTTATCT TAGTCGACTG TCTGACCCTG TGGCTGTCGA ACATACAGCT GAGTGACCGG GTATGGAAAC AGGAGAAGCA GGCCTTATTG GACGTTGTGA ATGAGCTCCC CGGAGAGGTT GTCTTTATCA GTAACGAGGT CGGTCAAGGT GTAGTCCCCT TGGGTGAGTT ATCACGTGAG TTTGTCGATG AATCCGGTTG GTTACATCAA AGCCTGGCAA AACAGGTCGA CAGGGTCACG ATGGCGATAG CCGGCTTACC TCTGGTGATT AAGTCGATGG AGGCATAA
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Protein sequence | MKQLIIGGAR SGKSRLAQEY AKTWQTRTSG DVILVATAES TEGAMAKRIA HHKSHRPQEW KVVETSLDLA QILIEESRSD NLILVDCLTL WLSNIQLSDR VWKQEKQALL DVVNELPGEV VFISNEVGQG VVPLGELSRE FVDESGWLHQ SLAKQVDRVT MAIAGLPLVI KSMEA
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