| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2161 |
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| Symbol | |
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| ID | 5609665 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2613537 |
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| End bp | 2614436 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640933065 |
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| Product | periplasmic binding protein |
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| Protein accession | YP_001473898 |
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| Protein GI | 157375298 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGATATC CAAGTCCCCT GCTGGCGCTT TGTCTGACTT TCTGTCTGGC ATTAAGCTGT
AGTTCTTCTG CCAGCGCCGA GAAGCAACCT CGCTTAATCG TATTGGCACC CCATGCCGTC
GAGATGATAT TCGAAATCGG CGCCGGAGAT ACCATCATAG GTACGGTCGA GTATGCCGAT
TATCCCAATG AAGCAAACCA AATTCGTCGT ATCGGTCGTT ACGATTTTAT CGATTATGAA
GCGGTGATGC TGCTTCAGCC TGATGCCATC ATAGTCAACA CCAGCACCAC CTCAGCCCCT
ATGCAGACAA GACTCAAAGA GCTGGGCTTT ACCTTGATAG ACTCAAGCGT CAGTGAGCTG
AAGCAGATCC CACAGCGTCT GCTGGAGTTA GGAGATATAA CTGGTCAACA GCAAGAAGCA
AAACGGAGTG CAGAGAAATT TGAAAGCACT CTGGCCGGGA TCAAGAGCCA GTATCAAGAC
CTGGCCCGTA TCGATCTCTT TTATCAGGTT TGGCCTGCGC CACTCACGAC GACGGCCAGC
AGCTGGATGA ATGAGATATT TGTAGGTTGC GGCGCCAATA ACGTCTTCGC TGACAGTGTC
AGTGAGTATC CCCAGGTGAG TCTTGAGCAG GTCCTCTCCT CTACACCCGA GATGATCATC
AAGCCGATAT ACCACGGTAA CAGTAATCAG GAGGCCATTA ACTGGGTCGA ATGGCCGGAG
ATCCCTGCAG TTGCAAATGA GCAGATCATT ACCATCGAAG GCGATCTTGT CCATAGAACC
GGGCCGCGGG TGTTAAAAGG CATGCAGCAG GTGTGTGAAA AAGTGGCACA GGCCCGTGCT
CAGAAACAAT CACAGAAACA ATCACAGAAA CTGTCTATCC AAAAGGCTGC AATCCAATGA
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| Protein sequence | MRYPSPLLAL CLTFCLALSC SSSASAEKQP RLIVLAPHAV EMIFEIGAGD TIIGTVEYAD
YPNEANQIRR IGRYDFIDYE AVMLLQPDAI IVNTSTTSAP MQTRLKELGF TLIDSSVSEL
KQIPQRLLEL GDITGQQQEA KRSAEKFEST LAGIKSQYQD LARIDLFYQV WPAPLTTTAS
SWMNEIFVGC GANNVFADSV SEYPQVSLEQ VLSSTPEMII KPIYHGNSNQ EAINWVEWPE
IPAVANEQII TIEGDLVHRT GPRVLKGMQQ VCEKVAQARA QKQSQKQSQK LSIQKAAIQ
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