| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2152 |
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| Symbol | |
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| ID | 5610424 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 2605004 |
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| End bp | 2605909 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640933056 |
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| Product | hypothetical protein |
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| Protein accession | YP_001473889 |
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| Protein GI | 157375289 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.978239 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTGTCAT CAATCTTAAG AAATATTTTG AATAAAGAGA CTGTTTTAAT TATCGGCGCA
GCTGGTAATA ACGGTGTTGC GACCATTGAA TCACTGGTCA ACAAAAACAT CTCTAAGTAT
CGAGTTCGGG CCGCAGTTCG CAGTCAGGAA AAAGCACAAA ATCTTCAAAA TAGGTTTCCT
GAAATAGAAA CGGTTATTAT CGATCTCGAC AAGCCGGAAA CACTTACCGC AGCTTACAAG
AATGTGACTA AGGTGTTTAT GATCCCCGGT AATGTTGAGA ATCGACAACA GCATTCAGAA
AACGCAGTTG ACGCTGCCGT TGCAGCAGGT ACGGTTAAAC AATTTGTGTA TTATTCTGTC
GTTGGTGCTG AGTATGAAGC TATATTGTTC GGCAAGCAGT TCCGTGCAGG TGAGAAGTAT
CTGGAAGCCT CAGGCCTCAA CTGGACTCAT CTACGTACAA TTTTCTTTCA GGATAATTTT
CACGGTTGGG CCGAAGGAAT CAAGCAAGGT GGCCTATATT TTGGTATTCG TGAAGGGCAA
TTTGCACCAC TTAATGTCGC AGATATCGGT GAAATGGCGG CGAACCTTCT GACAACAGAC
GGCCATCAGC ATAAAGCCTA TAATGTCACC GGGCCAGAGC TCCTGTCAGG TCAGGATATG
GCGGATGTCT TCACTGATGT TACTGGCAAG ACTGTGAGTT ATGTTTCACC TTCTACAGAA
GATACTCTCG ATTCTCTGTT AAATACCGGC TGGCCAGAGT GGCAAGCAAA GGGGATGCTT
GAATTGTTCG AGGTATTTGC AACTAACCAA GCGGCTATGG TTAGCCCCGA TGGTGAGCTG
TTGATGGGAC GTCCGATGAC GAAGATGAAA GATTATATTG CGGCGAATAA AACAGCATTT
ATCTAA
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| Protein sequence | MLSSILRNIL NKETVLIIGA AGNNGVATIE SLVNKNISKY RVRAAVRSQE KAQNLQNRFP
EIETVIIDLD KPETLTAAYK NVTKVFMIPG NVENRQQHSE NAVDAAVAAG TVKQFVYYSV
VGAEYEAILF GKQFRAGEKY LEASGLNWTH LRTIFFQDNF HGWAEGIKQG GLYFGIREGQ
FAPLNVADIG EMAANLLTTD GHQHKAYNVT GPELLSGQDM ADVFTDVTGK TVSYVSPSTE
DTLDSLLNTG WPEWQAKGML ELFEVFATNQ AAMVSPDGEL LMGRPMTKMK DYIAANKTAF
I
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