Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_2151 |
Symbol | |
ID | 5610423 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | + |
Start bp | 2604163 |
End bp | 2604561 |
Gene Length | 399 bp |
Protein Length | 132 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640933055 |
Product | transporter |
Protein accession | YP_001473888 |
Protein GI | 157375288 |
COG category | [S] Function unknown |
COG ID | [COG2259] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.447191 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.895246 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATACCT TACAAGTTTT TGCAGCCCCC TTAGGCCGCT TTTTGATAGC AATTATTTTC TTTCTGTCTG GCGTCACTAA GGTTACTCAA TATGCAGGCA CTCAAGGCTA CATGGAATCG ATGGGCGTTC CAGGAGCCTT GTTACCTTTG GTGATCCTTA CGGAAGTCAT TGGCGGAGTC GCAATTATCA TTGGTTGGAA AACCCGCTAC GCAGCTATAG CACTGGCCGG TTTTAGTGTT TTAGCCACTG TGTTTTTTCA TAATGATTTC AGTGTTCAAG CTGAAATGAT TAGTTTCATG AAAAACCTGG CAATTGCCGG TGGTTTTTTG ATGATATTCG CCAATGGACC AGGCTCATAT GCATTGGATA ATCGATTAAA GAAGAAATAT AACGAATAA
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Protein sequence | MNTLQVFAAP LGRFLIAIIF FLSGVTKVTQ YAGTQGYMES MGVPGALLPL VILTEVIGGV AIIIGWKTRY AAIALAGFSV LATVFFHNDF SVQAEMISFM KNLAIAGGFL MIFANGPGSY ALDNRLKKKY NE
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