| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2147 |
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| Symbol | |
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| ID | 5610529 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 2598738 |
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| End bp | 2599622 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640933051 |
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| Product | ABC transporter, ATP-binding protein |
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| Protein accession | YP_001473884 |
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| Protein GI | 157375284 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.387571 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.491991 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTCAGTTT TATTGAGTGT ACGTGAGCTG ACTCACCGTT ACGGTGACTC TGTTGCGGTC
AATAACATAA ATTTGGATAT TCAGGCGGGC CAGTGTTATG GCTTGCTTGG ACCCAATGGT
GCGGGTAAAT CGACGACGCT GGAGATCCTA GAGGGCGTGC TTAAGCCCAC TCGTGGTGAG
GTATTGTACC GAGGCCTGCC AATCGATAAA AACTTTAAGC AAGAGATCGG CATTCAGTTT
CAGTCGACAA CCTTGCCCGA CCACCTGACC GTATACGATT GCCTGAAACT CTTTTCAAGC
TTCTATCAGA GCCATACACC TATTCCTCAT CTGATAAAAC AGTGTCAGCT TTCAGATATC
GCAGACCAAT TTCATTACAC CCTCTCAGGC GGACAAAGAC AACGGTTATT GCTTGCACTG
AGTCTGATAA ACGACCCCGC ATTGCTCTTC TTAGATGAGC CCACTACCGG ACTCGACCCA
CAGGCCCGTC TGCATTTTTG GCAGTTGATC AGAGAAGTTA AACAGCAGGG CAAGACCATA
ATATTGACGA CGCATTACAT GGAAGAAGCG GAGCAACTAT GCGATCAGAT AGCGATCATG
GACAGAGGGG AGTTTATTGC CGAAGGCTCG CCAGACACCT TACTCAAAGA CAATTTCATG
CCTCAGATAG TCGAGCTCAA TGGTGAGTAT TCGGAGCGTG ACTTTGACGG CTTACCGGTA
AAGATAAGCC GGTGCGCAGG GCAGACACGA GTGGAATGTC ACTCCTTTAA CGATCTGCTC
CCTATGCTGA ATGCTTCGAC GGGCTCATCA AGCGGCATGG CAGTGCGTAA GCCGCACCTC
GAAGATCTGT TTTTAAAGTT AACCGGTAGT GAGCTACGAC TATGA
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| Protein sequence | MSVLLSVREL THRYGDSVAV NNINLDIQAG QCYGLLGPNG AGKSTTLEIL EGVLKPTRGE
VLYRGLPIDK NFKQEIGIQF QSTTLPDHLT VYDCLKLFSS FYQSHTPIPH LIKQCQLSDI
ADQFHYTLSG GQRQRLLLAL SLINDPALLF LDEPTTGLDP QARLHFWQLI REVKQQGKTI
ILTTHYMEEA EQLCDQIAIM DRGEFIAEGS PDTLLKDNFM PQIVELNGEY SERDFDGLPV
KISRCAGQTR VECHSFNDLL PMLNASTGSS SGMAVRKPHL EDLFLKLTGS ELRL
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