| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2136 |
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| Symbol | |
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| ID | 5610564 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2582563 |
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| End bp | 2583222 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640933039 |
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| Product | hypothetical protein |
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| Protein accession | YP_001473873 |
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| Protein GI | 157375273 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0670] Integral membrane protein, interacts with FtsH |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0452556 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.017863 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACAAC AAACACTCTA TTCTACAGGA GCTTCCACAC TGGAAGTGAA CAAGCTCCTG
AAAAACACCT ACATGTTACT TTCGATGACA TTGGCATTCT CTGCAGTTTG TGCAGGTATT
GCAATGGCAT TACAGATTGG CCCTATGCTC TCTATCGGTA TGTCACTTGG TAGCTTAGCG
ATTTTATTTG TGACATTGAG AAAAGCTGAA TCTGCTGCGG GTCTGTTTTG GGTATTCGCC
TTCACAGGTA TGCAAGGTGC CTCACTGGGT TATATTCTTA ACCATTACGC TGGCATGGCA
AATGGTCCAG AGTTAATCAT GCAAGCACTT GGTTTGACTT CGGTGATCTT CGTGACCTTA
TCGGGTTATG CCATCACAAC TAAGAAAGAT TTCTCATTTA TGAGAGGCTT CCTTATTGCC
GGTCTAGTGA TCATGTTTGT CGGCTTGCTG GTTAATATGT TCTTGGGCAA CAGCATGGTA
TTTATGGCGC TTAACGCGGG TATCGCATTG TTGATGACAG GTTTCATTCT TTATGACACC
AGCCGTATCA TTAATGGCGG CGAGACAAAT TACATCCGCG CCACAATCTC TCTTTACCTG
GATTTCCTTA ACCTATTCAT CGCTCTACTT CATCTAATGG GTATCGGCGG CGACGACTAA
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| Protein sequence | MTQQTLYSTG ASTLEVNKLL KNTYMLLSMT LAFSAVCAGI AMALQIGPML SIGMSLGSLA
ILFVTLRKAE SAAGLFWVFA FTGMQGASLG YILNHYAGMA NGPELIMQAL GLTSVIFVTL
SGYAITTKKD FSFMRGFLIA GLVIMFVGLL VNMFLGNSMV FMALNAGIAL LMTGFILYDT
SRIINGGETN YIRATISLYL DFLNLFIALL HLMGIGGDD
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