| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2124 |
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| Symbol | |
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| ID | 5610712 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2571083 |
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| End bp | 2572033 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640933027 |
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| Product | thioredoxin reductase |
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| Protein accession | YP_001473861 |
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| Protein GI | 157375261 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0492] Thioredoxin reductase |
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| TIGRFAM ID | [TIGR01292] thioredoxin-disulfide reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000128654 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0108632 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCAAG CTAGACACTG TGAACTACTA ATATTAGGGT CAGGCCCTGC AGGCTATACA
GCCGCAGTTT ATGCCGCTCG CGCAAACCTA AAACCTGTAT TAGTGACAGG TTTACAACAA
GGTGGTCAAT TAACTACCAC TACCGAAGTT GAGAACTGGC CCGGCGATGC TGAGGATCTG
ACCGGTCCGG CATTAATGGA GCGCATGCAA AAACATGCAG AGAAGTTTGA GACTGAAATC
CTTTTCGATC ATATCAATGA GGTTGATCTT AAGGTTCGCC CTTTCAAATT GAAAGGCGAC
AACGGTGATT TTACCTGTGA TGCACTCATT ATCTCAACGG GTGCCTCAGC CATGTATCTT
GGTCTGGAAT CTGAAGAAGC ATTCAAAGGC AAAGGCGTGT CAGCCTGTGC AACTTGTGAT
GGTTTTTTCT ATCGCAACCA GAAAGTTGCC GTGATCGGTG GCGGTAACAC AGCCGTCGAA
GAAGCACTAT ACCTCAGCAA CATCGCTTCT GAAGTCCACC TGATCCACCG TCGTGATGCA
TTCCGCAGCG AAAAAATCTT AACTAAGCGT CTTATGGATA AGGTCGAGAA CGGTAACATT
ATTCTTCACT TAGACAACAC ATTAGATGAA GTTGTCGGTG ATCAGATGGG TGTTACTGGC
CTTAAGATGA AGAGCACTAA AGACGGTTCT ATTACCGATC TTGAAGTTAT GGGTGTATTC
GTTGCCATCG GTCATAAGCC AAACACTCAG ATGTTTGAAG GCCAGTTAGA GATGAACAAT
GGTTATATCA AGGTTCAAAG TGGCCTCGAT GGTAATGCGA CTCAAGCGAG TATAGAAGGC
GTGTTTGCGG CAGGAGATGT AATGGATCAA CATTATCGTC AAGCCATCAC TTCAGCAGGA
ACCGGCTGCA TGGCCGCTCT CGATGCCGAG CGTTACTTAG ACTCGAAGTA A
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| Protein sequence | MSQARHCELL ILGSGPAGYT AAVYAARANL KPVLVTGLQQ GGQLTTTTEV ENWPGDAEDL
TGPALMERMQ KHAEKFETEI LFDHINEVDL KVRPFKLKGD NGDFTCDALI ISTGASAMYL
GLESEEAFKG KGVSACATCD GFFYRNQKVA VIGGGNTAVE EALYLSNIAS EVHLIHRRDA
FRSEKILTKR LMDKVENGNI ILHLDNTLDE VVGDQMGVTG LKMKSTKDGS ITDLEVMGVF
VAIGHKPNTQ MFEGQLEMNN GYIKVQSGLD GNATQASIEG VFAAGDVMDQ HYRQAITSAG
TGCMAALDAE RYLDSK
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