Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_2124 |
Symbol | |
ID | 5610712 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | - |
Start bp | 2571083 |
End bp | 2572033 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640933027 |
Product | thioredoxin reductase |
Protein accession | YP_001473861 |
Protein GI | 157375261 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0492] Thioredoxin reductase |
TIGRFAM ID | [TIGR01292] thioredoxin-disulfide reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000128654 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0108632 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCAAG CTAGACACTG TGAACTACTA ATATTAGGGT CAGGCCCTGC AGGCTATACA GCCGCAGTTT ATGCCGCTCG CGCAAACCTA AAACCTGTAT TAGTGACAGG TTTACAACAA GGTGGTCAAT TAACTACCAC TACCGAAGTT GAGAACTGGC CCGGCGATGC TGAGGATCTG ACCGGTCCGG CATTAATGGA GCGCATGCAA AAACATGCAG AGAAGTTTGA GACTGAAATC CTTTTCGATC ATATCAATGA GGTTGATCTT AAGGTTCGCC CTTTCAAATT GAAAGGCGAC AACGGTGATT TTACCTGTGA TGCACTCATT ATCTCAACGG GTGCCTCAGC CATGTATCTT GGTCTGGAAT CTGAAGAAGC ATTCAAAGGC AAAGGCGTGT CAGCCTGTGC AACTTGTGAT GGTTTTTTCT ATCGCAACCA GAAAGTTGCC GTGATCGGTG GCGGTAACAC AGCCGTCGAA GAAGCACTAT ACCTCAGCAA CATCGCTTCT GAAGTCCACC TGATCCACCG TCGTGATGCA TTCCGCAGCG AAAAAATCTT AACTAAGCGT CTTATGGATA AGGTCGAGAA CGGTAACATT ATTCTTCACT TAGACAACAC ATTAGATGAA GTTGTCGGTG ATCAGATGGG TGTTACTGGC CTTAAGATGA AGAGCACTAA AGACGGTTCT ATTACCGATC TTGAAGTTAT GGGTGTATTC GTTGCCATCG GTCATAAGCC AAACACTCAG ATGTTTGAAG GCCAGTTAGA GATGAACAAT GGTTATATCA AGGTTCAAAG TGGCCTCGAT GGTAATGCGA CTCAAGCGAG TATAGAAGGC GTGTTTGCGG CAGGAGATGT AATGGATCAA CATTATCGTC AAGCCATCAC TTCAGCAGGA ACCGGCTGCA TGGCCGCTCT CGATGCCGAG CGTTACTTAG ACTCGAAGTA A
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Protein sequence | MSQARHCELL ILGSGPAGYT AAVYAARANL KPVLVTGLQQ GGQLTTTTEV ENWPGDAEDL TGPALMERMQ KHAEKFETEI LFDHINEVDL KVRPFKLKGD NGDFTCDALI ISTGASAMYL GLESEEAFKG KGVSACATCD GFFYRNQKVA VIGGGNTAVE EALYLSNIAS EVHLIHRRDA FRSEKILTKR LMDKVENGNI ILHLDNTLDE VVGDQMGVTG LKMKSTKDGS ITDLEVMGVF VAIGHKPNTQ MFEGQLEMNN GYIKVQSGLD GNATQASIEG VFAAGDVMDQ HYRQAITSAG TGCMAALDAE RYLDSK
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