| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2121 |
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| Symbol | |
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| ID | 5610709 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 2569818 |
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| End bp | 2570153 |
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| Gene Length | 336 bp |
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| Protein Length | 111 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640933024 |
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| Product | translation initiation factor IF-3 |
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| Protein accession | YP_001473858 |
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| Protein GI | 157375258 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0290] Translation initiation factor 3 (IF-3) |
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| TIGRFAM ID | [TIGR00168] translation initiation factor IF-3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000482422 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0303282 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGACTACG GAAAGTTCCT TTTTGATAAA GCGAAAGCTC AAAAAGAACA AAAAAAGAAG
CAGAAACAGA TACAGGTGAA GGAAGTTAAA TTCCGTCCCG GTACTGATGA AAACGATTAT
CAGGTAAAAC TACGCAACCT GAATCGCTTT CTAGATGACG GTGACAAAGC GAAAGTAACG
CTGCGTTTTC GTGGTCGCGA AATGGCTCAC CAAAGTCTTG GTATGAATCT TTTGAATCGT
ATTAAAGATG ATTTGGCTGA GATAGCAGTA GTTGAGTCTT TCCCGAAAAT GGAAGGTCGT
CAAGCTGTGA TGGTCCTCGC GCCGAAAAAG AAATAG
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| Protein sequence | MDYGKFLFDK AKAQKEQKKK QKQIQVKEVK FRPGTDENDY QVKLRNLNRF LDDGDKAKVT
LRFRGREMAH QSLGMNLLNR IKDDLAEIAV VESFPKMEGR QAVMVLAPKK K
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