| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2112 |
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| Symbol | |
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| ID | 5611811 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 2555063 |
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| End bp | 2556187 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640933009 |
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| Product | 2-methylcitrate synthase |
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| Protein accession | YP_001473849 |
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| Protein GI | 157375249 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0372] Citrate synthase |
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| TIGRFAM ID | [TIGR01800] 2-methylcitrate synthase/citrate synthase II |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTAGATA AGAAACTCAG TGGTGCAGGC CTTCGTGGTC AAAGCGCAGG TGAAACAGCC
CTTTGTACAG TTGGAAAGTC AGGTTCAGGC CTGACCTACT GTGGCTATGA TGTTTCAGAC
TTGGCCGATA ATGCGACATT CGAAGAGGTA GCTTATCTGC TGTTTAATGG TGAGCTGCCA
AATCAGACTC AGCTGGATCA TTATAAAACA GAGTTATTCG CCCTGCGCGA TCTCCCTCAA
GCGCTGAAAG AGGTCCTGCA GCGGATCCCG GCCGATGCGC ACCCAATGGA TGTGATGCGT
ACAGGTTGCT CATTTTTGGG AAATCTTGAG CCGGAAAACG ATTTCACGGA GCAAAACAGA
GCGGCAAACC GGCTGTTAGC CGCGTTTCCT GCCATCATGT GTTACTGGTA TAAATTCTCT
CACGAAGGTG TTGAGATTGA TTGTGTGACT GAGGAAGACT CTATCGGTGG ACACTTCCTG
CACCTGCTTA ACGGTAAGGC ACCATCGGAG CAGCACCGCC GCGTGATGGA TGTATCGTTA
ATTCTCTATG CCGAGCATGA GTTCAACGCA TCGACATTTA CCGCACGCGT GTGTGCATCC
ACTCTATCAG ATATGTTCTC ATGTATTACC GGTGCTATCG GAACCTTACG TGGGCCACTG
CATGGTGGCG CGAACGAAGC GGCAATGGAT ATGATCCAAA AATTCAGCTC GCCTGCAGAT
GCCAAGACTC AAATGGCCGG CATGCTGGAG CGCAAAGAGA AGATCATGGG CTTTGGTCAT
GCAATCTATC GCACTTCTGA TCCCCGAAAT GTCATCATTA AAACCTGGTC TGAAAAGCTG
GCTAATGAAT TCGGCGATAC GTCACTTTAT GATATCTCTG TCGCCTGTGA AGAGTTCATG
TGGGACAGCA AGAAGCTGTT TTGTAATGCG GACTTCTTCC ATGCATCGGC TTATCACTTC
ATGGGTATTC CGACTAAGCT GTTTACGCCA ATATTCGTCT GTTCACGTCT TACTGGCTGG
GCCGCTCATG TGATGGAGCA GCGCTCTAAC AACCGTATCA TTCGCCCGAG CGCAGACTAC
ATAGGTTCAG AGCCAAGAAC CGTCACACCT ATCAGTCAAA GATAA
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| Protein sequence | MVDKKLSGAG LRGQSAGETA LCTVGKSGSG LTYCGYDVSD LADNATFEEV AYLLFNGELP
NQTQLDHYKT ELFALRDLPQ ALKEVLQRIP ADAHPMDVMR TGCSFLGNLE PENDFTEQNR
AANRLLAAFP AIMCYWYKFS HEGVEIDCVT EEDSIGGHFL HLLNGKAPSE QHRRVMDVSL
ILYAEHEFNA STFTARVCAS TLSDMFSCIT GAIGTLRGPL HGGANEAAMD MIQKFSSPAD
AKTQMAGMLE RKEKIMGFGH AIYRTSDPRN VIIKTWSEKL ANEFGDTSLY DISVACEEFM
WDSKKLFCNA DFFHASAYHF MGIPTKLFTP IFVCSRLTGW AAHVMEQRSN NRIIRPSADY
IGSEPRTVTP ISQR
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