| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2105 |
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| Symbol | |
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| ID | 5612794 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 2547010 |
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| End bp | 2548236 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640933002 |
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| Product | hypothetical protein |
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| Protein accession | YP_001473842 |
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| Protein GI | 157375242 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0348] Polyferredoxin |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATAGCA AGAAACGAAG CGATTTCTGG AAAAAAGTTG CCAGTATCGT GTCAGTGATA
CTCTTACTAC TGGCCTGGTA TGGTGGAAGT ACCCGAATTA CCGATAACCA GAGCGGTATG
GTGGATCAGT TGTTGATTAA AGGAGATCTC TTAAATCAGA TCGATGACCG CCTATATGAA
GGGAGGATCC CGAATAACCT TAACCCGGTC GAGTATATCG GTCTTGGTAG TGGCATTGGC
TACGGGGGCA TGACTGAGGT TGCAGTGACA GTCTCTTCAC TGGGGGAAAT TCAACGAATC
GCTGTATTAT CATCTAAGGA CACCAGCTCC TATCTGGATA AGGTCATCCA ATCAAATTTG
ATGGAGAAGT TACTTGGAGA AAATATCAAA TCGAACTTCG AAATTGATGG TGTCAGTGGG
GCGACGATAT CGACCAATGC ATTAACCGAG GCCATTAAAC GGGCAGCAGA TCCGGTTAGG
GTCGAACTGT TCGATATTAA TCGAGCTGTG AATGAAAAGC CCATCTCTTA TTTTCGATGG
TTGGATCTGA TGGCTATTGT GATGTTTACG ATGGCTATTT TGGTGAACAA AACACGTCAT
CGCAAAAAGA GTATGTTCAA CTGGGCGATT ATGCTCACCT CTATGTGTGT ATTTGGTTTT
TACTCCTCTA GCTTATTTTC ATCATCGACA ATGGGGATCC TTATTTCAGG GACGTGGCTT
AGCGGGCTGG GTAACTATAC CTCGTTAATC TTACTTTCTC TGGTGATCCT ATACATCATC
GCGACGAATA AGAACGTGTA TTGCAATACT CTCTGTCCCT TTGGGGCGAC ACAGGAGTGT
TTGGCAAAGC TTGGCAATAC AAAAACGATA AGTTTGACAC CTGTTTTTTT TGAATGGTTT
CCAAGGGGAC TCTTACTGGT CACTTTATGC CTAGGCCTCT ATTACCGCAA TCCGGCGTCA
TTTTCATATG AACCATTCGG CATCATGTTT GGCATGATAG GTTCAATATA TCTCTTTGTT
TTAACGACGG TAACAATCGT AACGTCATTG GTTGTCAAGC GACCTTGGTG TCGAACCCTT
TGTCCGATGA ATCCAATGAC AGATTTTATT CGGTTCAACA GGCAATGGTT TAAGTCAATG
TTAAATAAAC ATCTAGCTAA AAGAGAAATA ATGGAAGCTA ATCAAATGGC TGATGCGGCA
GTAAAGAGCA ATGAGGTGTC TAAATGA
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| Protein sequence | MYSKKRSDFW KKVASIVSVI LLLLAWYGGS TRITDNQSGM VDQLLIKGDL LNQIDDRLYE
GRIPNNLNPV EYIGLGSGIG YGGMTEVAVT VSSLGEIQRI AVLSSKDTSS YLDKVIQSNL
MEKLLGENIK SNFEIDGVSG ATISTNALTE AIKRAADPVR VELFDINRAV NEKPISYFRW
LDLMAIVMFT MAILVNKTRH RKKSMFNWAI MLTSMCVFGF YSSSLFSSST MGILISGTWL
SGLGNYTSLI LLSLVILYII ATNKNVYCNT LCPFGATQEC LAKLGNTKTI SLTPVFFEWF
PRGLLLVTLC LGLYYRNPAS FSYEPFGIMF GMIGSIYLFV LTTVTIVTSL VVKRPWCRTL
CPMNPMTDFI RFNRQWFKSM LNKHLAKREI MEANQMADAA VKSNEVSK
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