| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2095 |
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| Symbol | |
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| ID | 5610272 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 2536105 |
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| End bp | 2536872 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640932992 |
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| Product | ABC-type cobalt transport system permease component CbiQ and related transporter-like protein |
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| Protein accession | YP_001473832 |
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| Protein GI | 157375232 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0619] ABC-type cobalt transport system, permease component CbiQ and related transporters |
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| TIGRFAM ID | [TIGR02454] cobalt ABC transporter, permease protein CbiQ |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0329891 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATTGAGA CCCTGCTAGC CCCTCAAATT ACCGGTGAGA AGTCTATACC AATCCCCCCG
AAGCTTAGGG TCGTGCTGAT CGTATGCCTG GCAATGGCAA CGGTGTTGAC CTCATGCTGG
CTAACCTTAT GGTTATTCAT GGCATTGGTG GTTTACCTGT GGCGGCGTAG TGACTTGAGT
GCGAAACAAA CGATTAAACG CTTGTTGGCA ATGGACTGCT TGATATTATT CACTGTTGCC
TTAATCCCTT TCAGTGTGCC GGGGGAGCCT CTCTTTAGTA TCTTGAGTTT TACGGCGACT
AAGGAAGGTG GGCTGATGGC TATGATGATC TTATTAAAAG CCAACATTGT AATGGTAACT
GTCATGGCGC TCTGTGAAGG AGTCGATGCT CTCACTTTAG GCAAGGCATT GGTGGAACTG
GGAGTGTCGA GACGTTTCGC GCTCTTGATG CAATTTACCG TTCGGTATAT CGGGCTTTTG
TATCTGGAGT TTCATCGATT ACGCCAATCA ATGAGGGTCC GTGGGTTTAA GGCCAGAAAT
TCCATGCATA CCTGGCGCAG CTATGGTTAT CTGTTCGGTA TGCTGCTGGT GCGATCCTTC
GACAGAGCCG ATAGAATTTC ACAGGCGATG AAGTGCAGAG GGTTTCGGGG GCATTTTCTC
TCTCATGAGC GCTTACCGGT AACCAAACGT GAGTATGCTC ACTTTGCCGC ATACCTCTCC
CTTATCAGTT TAATCTTTTG CACCTCACTT AGCTCTTTTA ACGTATAA
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| Protein sequence | MIETLLAPQI TGEKSIPIPP KLRVVLIVCL AMATVLTSCW LTLWLFMALV VYLWRRSDLS
AKQTIKRLLA MDCLILFTVA LIPFSVPGEP LFSILSFTAT KEGGLMAMMI LLKANIVMVT
VMALCEGVDA LTLGKALVEL GVSRRFALLM QFTVRYIGLL YLEFHRLRQS MRVRGFKARN
SMHTWRSYGY LFGMLLVRSF DRADRISQAM KCRGFRGHFL SHERLPVTKR EYAHFAAYLS
LISLIFCTSL SSFNV
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