Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_2087 |
Symbol | |
ID | 5610464 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | + |
Start bp | 2528448 |
End bp | 2529221 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640932984 |
Product | precorrin-3 methylase |
Protein accession | YP_001473824 |
Protein GI | 157375224 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2875] Precorrin-4 methylase |
TIGRFAM ID | [TIGR01465] precorrin-4 C11-methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGTAT ACTTTATTGG TGCAGGCCCA GGAGATCCAG ATCTGATCAC AGTTAAAGGG GCTAAATTAG TCGAGCGCTG TCCGGTTGTT CTTTATACGG GATCTTTGGT CCCGGCCGAG GTCGTGGCCC GTGCAAACGA AGATGCACTG GTTTTAAGCT CTGAAGCTAT GGATCTCGAT GAGATCGTCT CTGTATGTAA GCAGGCAGAT GATAATAATC AAGATGTGGC ACGAGTACAG ACGGGCGATC TCTCTATCTA TAGCTCCCTT GCCGAAACCA CTCGCAGGCT CGATGATCTG GATATTGACT GGCAAGTCGT TCCGGGGGTC AGCAGCTTTC AGGCAAGTGC CGCTGCATTG GGCCAGGAAT TAACCTTGCC AGAGGTATGC CAAACCATCA TCTTGAGCCG TGCCTCCGGT CGAACGCCCG TGCCGGACAA AGAGAATCTT AAGTCATTAG CAAAACATGA AGCGACACTA TGCCTATTTC TCTCTATTAG TCTTATCCGC AAAGTGGTAC GTGAGCTAAA AGAGGTCTAT TCAGATGATT GGCCTATCGC CGTCGTCGAG AAAGCCTCTC ACCCTGAGCA GCGGATCATT CGTGGCACTT TAGATGATAT TACCGAGAAA GTAGAGGCCG CGGGTATAAA AGCGACGGCC ATGATCATTG TCAGTAAAGT TTTGCAAGAA AAAGACTTTA ACGATTCAAA ACTCTATGAC AACACATTTT CTCATGGTTT TCGTCGTGCC AGAAATGTGG AGGCGAACTC ATGA
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Protein sequence | MTVYFIGAGP GDPDLITVKG AKLVERCPVV LYTGSLVPAE VVARANEDAL VLSSEAMDLD EIVSVCKQAD DNNQDVARVQ TGDLSIYSSL AETTRRLDDL DIDWQVVPGV SSFQASAAAL GQELTLPEVC QTIILSRASG RTPVPDKENL KSLAKHEATL CLFLSISLIR KVVRELKEVY SDDWPIAVVE KASHPEQRII RGTLDDITEK VEAAGIKATA MIIVSKVLQE KDFNDSKLYD NTFSHGFRRA RNVEANS
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