Gene Ssed_2083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_2083 
Symbol 
ID5611289 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp2524381 
End bp2525139 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content53% 
IMG OID640932980 
Productprecorrin-2 methyltransferase 
Protein accessionYP_001473820 
Protein GI157375220 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2243] Precorrin-2 methylase 
TIGRFAM ID[TIGR01467] precorrin-2 C20-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCAGA AAATCGGAAA ACTCTATGCC ATAGGTGTTG GGCCTGGCGA CAGCTCATTG 
ATGACACTTC GTTCGGTAGA GTTATTGAAA ACCATCGATG TTATCGCCAT TCCCGAGAAG
AACCGGGGCC AGCAGGACTC ATTTGCCTGG TCAATCGTAC GCGGCGCCAT CGATGAAGAT
CAAATGCAGG GACAGCGTAG CTATTTGTGG TTCCCGATGA GTAAAGACCA CACGATCACC
GTTCCGGCTT GGCGAGAGGG CGCGGCTACC ATTGCCGAGC ACCTCAAGGC GGGCAAAGAT
GTGGCCTTCA TCACCGAGGG CGATCCATCT GTTTTTAGCA CCTGGGCCTA TCTGCAGGAG
GAATTAAGCG AGCATTTCAA AGAACTTGAG GTTGAAATTG TTCCGGGTGT CACCTCATTA
ACTGCGGTAC CCGCGGCGAC TCAGATCCCG CTCTGTGATG GGGAAGAGCG TTTCTGTGTT
GTTCCGGCGA CTTATGGAGT CAGCATCCTG ACTGAGCTGG TCAAAGAGTT CGATACCATT
TTGCTGCTTA AATGTGGCCG CATGGTGCCG GAGCTGATCA AGGTATTGGA ACCACTGGGA
CTGCTGGAGT GTGCAACCTA TGTCTCCTAT GCGACTGACC CTCGTCAGCG GGTGTTTACG
GACTTGAGAG AGGTTCCCGA AGAGTTTTGC TACTTCGCCA CCGTGCAGCT ATCGGTTCGG
GTACGTAAAG GGGTGTTACG CCACGGTGGG CTGGCCTAA
 
Protein sequence
MTQKIGKLYA IGVGPGDSSL MTLRSVELLK TIDVIAIPEK NRGQQDSFAW SIVRGAIDED 
QMQGQRSYLW FPMSKDHTIT VPAWREGAAT IAEHLKAGKD VAFITEGDPS VFSTWAYLQE
ELSEHFKELE VEIVPGVTSL TAVPAATQIP LCDGEERFCV VPATYGVSIL TELVKEFDTI
LLLKCGRMVP ELIKVLEPLG LLECATYVSY ATDPRQRVFT DLREVPEEFC YFATVQLSVR
VRKGVLRHGG LA