Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_2083 |
Symbol | |
ID | 5611289 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | + |
Start bp | 2524381 |
End bp | 2525139 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640932980 |
Product | precorrin-2 methyltransferase |
Protein accession | YP_001473820 |
Protein GI | 157375220 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2243] Precorrin-2 methylase |
TIGRFAM ID | [TIGR01467] precorrin-2 C20-methyltransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCCAGA AAATCGGAAA ACTCTATGCC ATAGGTGTTG GGCCTGGCGA CAGCTCATTG ATGACACTTC GTTCGGTAGA GTTATTGAAA ACCATCGATG TTATCGCCAT TCCCGAGAAG AACCGGGGCC AGCAGGACTC ATTTGCCTGG TCAATCGTAC GCGGCGCCAT CGATGAAGAT CAAATGCAGG GACAGCGTAG CTATTTGTGG TTCCCGATGA GTAAAGACCA CACGATCACC GTTCCGGCTT GGCGAGAGGG CGCGGCTACC ATTGCCGAGC ACCTCAAGGC GGGCAAAGAT GTGGCCTTCA TCACCGAGGG CGATCCATCT GTTTTTAGCA CCTGGGCCTA TCTGCAGGAG GAATTAAGCG AGCATTTCAA AGAACTTGAG GTTGAAATTG TTCCGGGTGT CACCTCATTA ACTGCGGTAC CCGCGGCGAC TCAGATCCCG CTCTGTGATG GGGAAGAGCG TTTCTGTGTT GTTCCGGCGA CTTATGGAGT CAGCATCCTG ACTGAGCTGG TCAAAGAGTT CGATACCATT TTGCTGCTTA AATGTGGCCG CATGGTGCCG GAGCTGATCA AGGTATTGGA ACCACTGGGA CTGCTGGAGT GTGCAACCTA TGTCTCCTAT GCGACTGACC CTCGTCAGCG GGTGTTTACG GACTTGAGAG AGGTTCCCGA AGAGTTTTGC TACTTCGCCA CCGTGCAGCT ATCGGTTCGG GTACGTAAAG GGGTGTTACG CCACGGTGGG CTGGCCTAA
|
Protein sequence | MTQKIGKLYA IGVGPGDSSL MTLRSVELLK TIDVIAIPEK NRGQQDSFAW SIVRGAIDED QMQGQRSYLW FPMSKDHTIT VPAWREGAAT IAEHLKAGKD VAFITEGDPS VFSTWAYLQE ELSEHFKELE VEIVPGVTSL TAVPAATQIP LCDGEERFCV VPATYGVSIL TELVKEFDTI LLLKCGRMVP ELIKVLEPLG LLECATYVSY ATDPRQRVFT DLREVPEEFC YFATVQLSVR VRKGVLRHGG LA
|
| |