| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2073 |
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| Symbol | |
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| ID | 5614244 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 2512063 |
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| End bp | 2512704 |
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| Gene Length | 642 bp |
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| Protein Length | 213 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640932970 |
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| Product | keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase |
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| Protein accession | YP_001473810 |
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| Protein GI | 157375210 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0800] 2-keto-3-deoxy-6-phosphogluconate aldolase |
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| TIGRFAM ID | [TIGR01182] Entner-Doudoroff aldolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.119512 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0282113 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTTGAGA ATAACTGGTC GTTACAACCA CAAGATATTT TTAATCGAAG CCCTATTGTT
CCTGTTATGG TTATCAATAA GATTGAAGAT GCCGTGCCAT TAGCCAATGC ACTCGTTGCA
GGTGGAATTA GCGTACTCGA GGTGACGCTG CGTACACCTT GCGCTCTGGA AGCGATAACC
AAAATTGCCA AAGAGGTGCC CGATGCCTTA GTCGGTGCCG GTACGATTCT GAATGAAACA
CAGTTGAAGC AGGCGGAAGA AGCCGGCGCT CAATTTGTTA TCACACCTGG TGCAACACCG
AGTCTATTGA AGGCCGCTAT GGCGGGAAAA ATCCCTTTGA TTCCTGGTGT TGCCAGTATA
TCTGAAGTGA TGACTGGTAT GGCATTGGGG TATACCAATT TTAAGTTTTT CCCGGCCGAA
GCATCGGGTG GCGTAAATGC TCTTAAGGCA TTCTCAGGTC CTCTTGCGGA TATTCGCTTC
TGTCCAACGG GTGGCATTAC ACCTAGCAGT TACAGAGATT ACCTGGCGCT TAAAAATGTC
GATTGTATCG GTGGCAGCTG GATAGCCCCA TCGGATGCGA TGGAGCAGGG TGATTGGGAG
CGCATTACAC AGTTGTGTAA AGAAGCGATC AGCGGTATTT AA
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| Protein sequence | MLENNWSLQP QDIFNRSPIV PVMVINKIED AVPLANALVA GGISVLEVTL RTPCALEAIT
KIAKEVPDAL VGAGTILNET QLKQAEEAGA QFVITPGATP SLLKAAMAGK IPLIPGVASI
SEVMTGMALG YTNFKFFPAE ASGGVNALKA FSGPLADIRF CPTGGITPSS YRDYLALKNV
DCIGGSWIAP SDAMEQGDWE RITQLCKEAI SGI
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