| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2070 |
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| Symbol | |
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| ID | 5611540 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 2508026 |
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| End bp | 2509498 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640932967 |
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| Product | glucose-6-phosphate 1-dehydrogenase |
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| Protein accession | YP_001473807 |
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| Protein GI | 157375207 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0364] Glucose-6-phosphate 1-dehydrogenase |
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| TIGRFAM ID | [TIGR00871] glucose-6-phosphate 1-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000903154 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.000676644 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGGCATAA CAACACCAGA AGCCAAAGCT TGTGATTTTG TATTGTTTGG TACTAAAGGG
GACTTGGCTC GCCGTAAGTT ACTTCCCTCA TTATACCAAC TCGACAAAGC TGGTCTTTTA
AACGAAGAGA CAAAAGTGCT CGGCGTTGCA AAAGATGCAT TCACCCAAGA AGAGTATCAA
GAGTTAGTCG TAAAAGCTTT GCGGGGGTTT GTAAAAGAGG AGTTGTGTGA ACTGACACTC
GAACGCTTCT TAGCACGTTG TCATTATGTT GGTACTAATT TCACTGAGTC TGAAGGTTAC
AAGACTTTTC ATGACATTTT AGAACCCAGT AAACGTGTCA TGGTGAGTTA CTTTGCCACT
CCTCCAGCCA TCTTCGGTGA TATTTGTCGC TGCCTCCACG AACAAAATCT TATCTATCCT
GATTCACGTG TTGTTCTTGA AAAACCAATC GGCTCCGATC TCGAATCTTC TAAAGTGATT
AATGACCAAG TCTCAGCTTA CTATAAAGAG AGTCAGGTAT ACCGTATCGA CCACTATTTA
GGTAAAGAGA CTGTACAGAA TCTTATTGCG CTTCGCTTTG CCAATTCACT GTTTGCTTCT
AAATGGGATA ATCGCACCAT CGATCATGTA CAGATCACGG TGGCCGAAGA GGTGGGTATC
GAGGGCCGTT GGGGTTACTT CGATAAAGCG GGTCAAATGC GTGACATGAT CCAAAACCAC
CTGCTACAAG TACTCACTTT AGTCGCAATG GATCCACCAG TTAACCTGGA TGCCGATAGT
ATTCGTGACG AGAAAGTAAA AGTGCTTAAG TCACTGCGTC CAATCAATTC AGATAATATT
TACGAAAATA CCGTTAGAGG CCAATACTCC TCAGGTTTCC TACAGGGCTC TCCGGTTCCT
GGTTACCTCG AAGAAGAGGG GGCCAATACC CAGTCTAATG CGGAAACATT TGTCGCCTTG
CGTGTCGACA TCGATAACTG GCGTTGGTCT GGCGTACCTT TTTACCTTCG AAGTGGTAAA
CGCATGCCGA CTAAGAGTTC TGAGATTGTG GTTTACTTCA AAAACCCACC TCATAACCTT
TACCGCTCAA ACTATCGTAA CTTGCCGCCG AATAAACTCA CCATTCGTCT TCAACCACAT
GAAGGTGTTG AAATTCAGAT GATGAACAAG GTGCCGGGTC TGGAGCAGAA ACAACGTCTG
CAAACAACCA AACTCGATTT AAGTTTCTCC GATACCTTCA AGAGCGAACG TATTGCCGAT
GCCTATGAGC GTCTGTTACT CGAAGCCATG TTAGGAAATC AAGCCTTGTT TGTTCGTCGT
GATGAAGTTG AACATTCATG GAGATGGGTC GACGGTATTA TTGAAGCTTG GGAAGATAGC
AACGAGAAGC CAAAGGCTTA CCCTGCCGGA AGTTGGGGAC CAGTGGCATC AGTTGCATTG
ATAGCCAAAG ACGGCCGTTC GTGGGACGAG TAG
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| Protein sequence | MGITTPEAKA CDFVLFGTKG DLARRKLLPS LYQLDKAGLL NEETKVLGVA KDAFTQEEYQ
ELVVKALRGF VKEELCELTL ERFLARCHYV GTNFTESEGY KTFHDILEPS KRVMVSYFAT
PPAIFGDICR CLHEQNLIYP DSRVVLEKPI GSDLESSKVI NDQVSAYYKE SQVYRIDHYL
GKETVQNLIA LRFANSLFAS KWDNRTIDHV QITVAEEVGI EGRWGYFDKA GQMRDMIQNH
LLQVLTLVAM DPPVNLDADS IRDEKVKVLK SLRPINSDNI YENTVRGQYS SGFLQGSPVP
GYLEEEGANT QSNAETFVAL RVDIDNWRWS GVPFYLRSGK RMPTKSSEIV VYFKNPPHNL
YRSNYRNLPP NKLTIRLQPH EGVEIQMMNK VPGLEQKQRL QTTKLDLSFS DTFKSERIAD
AYERLLLEAM LGNQALFVRR DEVEHSWRWV DGIIEAWEDS NEKPKAYPAG SWGPVASVAL
IAKDGRSWDE
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