| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2064 |
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| Symbol | |
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| ID | 5612272 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 2498889 |
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| End bp | 2499740 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640932961 |
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| Product | alpha/beta fold family hydrolase |
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| Protein accession | YP_001473801 |
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| Protein GI | 157375201 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2819] Predicted hydrolase of the alpha/beta superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00685345 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATCTGTT ATTTACCAAA GGAAGTTGCA TTGAAACTAA TCACATTTGT TTTTGTTTTT
CTATGTAGTA CGCCGTTATT GGCCGATACC GTCTTTGAGA TCCCAAGAAG TACAGTTGTT
GAATTACAAG AGACTAAGAC TGAAAGAGTT TATCCGCTGT TTATCAAGTT ACCACGATCC
TATTATTCAG AAGTTAAGCG AAAGTATCCG GTTATCTATT TAACCGATGC CTGGTACAGT
TTTCAAATCG TTTCCGGAGC GACTCGTTTT CCGATGAATA GTGGTGTAAT GGAAGAGGCC
ATTATTGTCG GAATTTCATA CGCTAAAGGT TCAAGGGGAT CTGCGAGTCG AATACGAGAT
TACACACCGA TAAAAGCCGA TAGCTGGAAA CTTGAAACGG GTAATGCCGA TGGGCATATA
TCGTTCTTTA AAAATACAGT TTTCCCTCAC ATTGAGAGTC ATTATAGAGC AAGCTCAACA
CAGAGGACAT TTGTCGGTAA CTCTCTGGGT GGTTTGCTTG GAACCTATAT TCTATTTACA
CAACCTGATA TGTTTTCAAG TTACATTATT GGCAGCCCCT CGCTCTGGTA TAACGATAGT
TACCTATTGT CAGAGTCAGT AAAAACGCCC GCTAGCCCAG TTCGGTTATA TTTGTCTGTA
GGCAGTCTGG AGAGGCCTGA ATACGGTCAA AACCAAGACT TGGTTGCCGG GGCCAACGCC
TTGGCAGATA AGCTTAAAGA TCATAAGTAT CCAAATCTTG ACCTGAAATT TTCAGTTATC
GAAGGTGCCA GGCATGCTAC TGCTTTTCCT ACTACTGTGA TTCAAGGATT GGATTGGTTA
TACGGCAAAT GA
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| Protein sequence | MICYLPKEVA LKLITFVFVF LCSTPLLADT VFEIPRSTVV ELQETKTERV YPLFIKLPRS
YYSEVKRKYP VIYLTDAWYS FQIVSGATRF PMNSGVMEEA IIVGISYAKG SRGSASRIRD
YTPIKADSWK LETGNADGHI SFFKNTVFPH IESHYRASST QRTFVGNSLG GLLGTYILFT
QPDMFSSYII GSPSLWYNDS YLLSESVKTP ASPVRLYLSV GSLERPEYGQ NQDLVAGANA
LADKLKDHKY PNLDLKFSVI EGARHATAFP TTVIQGLDWL YGK
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