| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2063 |
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| Symbol | |
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| ID | 5612271 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 2498422 |
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| End bp | 2498889 |
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| Gene Length | 468 bp |
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| Protein Length | 155 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640932960 |
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| Product | hypothetical protein |
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| Protein accession | YP_001473800 |
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| Protein GI | 157375200 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1764] Predicted redox protein, regulator of disulfide bond formation |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00597173 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGTCTGAAT ATACAGCCGT AATTCGATGG ACCCGTGGTG AAGATGAGAG CTTTAGTGAT
AACCAATATA GTCGAGGGCA TACATGGGAA TTTGACGGAG GCGTTACAGT CCCGGCGTCA
TCCTCTCCCC ATGTTGTTCC ACTACCTTAT TCTGTCGAGG CGAACGTTGA CCCTGAGGAA
GCGTTTATCG CTGCCTTGTC CAGCTGTCAT ATGCTGGTGT TTCTCTCTAT TGCTTCCAAG
CGTAAGTACA TCATAGAGAG CTATGTTGAT AATGCCATCG GTCTAATGGA AAAGGATGTC
GATGGGAAAA CATCCGTTAC CAAAGTAAAG TTACGGCCTC ACATCTTGTT TTCGGGTGAA
CGCAAGCCAA CGATGGAGCA GTTGGAAAAA ATGCATCACA TGTCACACGA GAATTGCTTC
ATAGCGAATT CGGTAAAGAC AGAGGTTTCA ACTGAAATTA TTGTCTGA
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| Protein sequence | MSEYTAVIRW TRGEDESFSD NQYSRGHTWE FDGGVTVPAS SSPHVVPLPY SVEANVDPEE
AFIAALSSCH MLVFLSIASK RKYIIESYVD NAIGLMEKDV DGKTSVTKVK LRPHILFSGE
RKPTMEQLEK MHHMSHENCF IANSVKTEVS TEIIV
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