| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2056 |
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| Symbol | |
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| ID | 5612383 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 2490380 |
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| End bp | 2490970 |
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| Gene Length | 591 bp |
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| Protein Length | 196 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640932953 |
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| Product | Smr protein/MutS2 |
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| Protein accession | YP_001473793 |
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| Protein GI | 157375193 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2840] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000826429 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.140995 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGTGAATG ATGATGTTTC ATCCTTTCTG GACGAGATGG CAGGGGTTAA GCCTCTAAGT
GGAAGTGAGC AAATCAGGCC TATCTGCAAC AGTGATATCT CGGCATCCCA ATTAGCCCGA
AAAAAAGCGG CACAATTATC AGAAGCGTTA CTGCTGCTAA CTACAGATAT TAACCTTATC
AACCCTGTAG AGCCCGAAGA GGTGATAAGT GTCTGTCGGG ACGGTGTTCA AACGCCTGTT
TTCAAGCACC TGAGTGCAGG AAAATATACA TTTCTCTCGG AGTTGGACCT TCATGCTTTA
AATATGCGTC AGGCAAGGGA GGCGTTATAT CACTATATCG AGGACAGATA CGAGAAAGGC
GAGCGGTGCG TTCTGGTCAT TCACGGTAAA GGCTTTAAGA GTAAACCGAT AAATGCACTG
ATTAAATCAT GTGTGGTCAA TTGGCTGGCG CACTTAGATA AAGTGTTAGC TTTTCATAGC
GCCAAAAGAG AGCACGGAGG AACGGGCGCT TTATATGTGA TGTTGAGTAA GTCTGAAAAT
AAACGTATCG AGTCGAGAGA GCAAAATCAT AAGGGTAGCG GTTTCAGATA G
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| Protein sequence | MVNDDVSSFL DEMAGVKPLS GSEQIRPICN SDISASQLAR KKAAQLSEAL LLLTTDINLI
NPVEPEEVIS VCRDGVQTPV FKHLSAGKYT FLSELDLHAL NMRQAREALY HYIEDRYEKG
ERCVLVIHGK GFKSKPINAL IKSCVVNWLA HLDKVLAFHS AKREHGGTGA LYVMLSKSEN
KRIESREQNH KGSGFR
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