| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2043 |
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| Symbol | |
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| ID | 5610784 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2473971 |
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| End bp | 2474540 |
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| Gene Length | 570 bp |
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| Protein Length | 189 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640932929 |
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| Product | electron transport complex protein RnfB |
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| Protein accession | YP_001473780 |
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| Protein GI | 157375180 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2878] Predicted NADH:ubiquinone oxidoreductase, subunit RnfB |
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| TIGRFAM ID | [TIGR01944] electron transport complex, RnfABCDGE type, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0243874 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCCGGAA TTTTTATCGC AATAATTTTA CTGACAATTC TGGCACTCTT GTTTGGTATT
TTACTCGGTT TTGCCGCAGA GAAATTTAAA GTGGAGGGCG ATCCACTTGT CGACCAGTTA
GAAGCTCTCC TGCCTCAGAC TCAATGTGGT CAGTGTGGAT ATCCTGGCTG CCGTCCCTAC
GCCGAGGCGA TTGCCAACGG CGAAAAAATC AATTTGTGCC CGCCCGGTGG CAGTGCCACG
ATGGAAAAGT TAGCCGAGAT GGCAGGGGTT GAACCTGAGC CCCTTTCGGC CACCGAAGAG
GTACAAGTCA AGAAAGTCGC TTATATCCGT GAAGAGGAAT GTATAGGCTG CACTAAGTGC
ATTCAAGCCT GTCCTGTCGA TGCCATCTTA GGCAGCGGTA AGTTGATGCA CACAGTTATC
ACCGACTACT GCACCGGCTG TGACCTTTGC GTAGCGCCCT GCCCGGTTGA TTGCATAGAT
ATGCTCCCCG TTGAACAAAC CGTGAAAAAT TGGGATTGGA AGCTTAATGC TATTCCCGTA
AAAACCTTGG ATGAGGATTG CCAGTGCTAA
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| Protein sequence | MSGIFIAIIL LTILALLFGI LLGFAAEKFK VEGDPLVDQL EALLPQTQCG QCGYPGCRPY
AEAIANGEKI NLCPPGGSAT MEKLAEMAGV EPEPLSATEE VQVKKVAYIR EEECIGCTKC
IQACPVDAIL GSGKLMHTVI TDYCTGCDLC VAPCPVDCID MLPVEQTVKN WDWKLNAIPV
KTLDEDCQC
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