| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2039 |
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| Symbol | |
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| ID | 5614004 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2469030 |
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| End bp | 2469740 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640932925 |
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| Product | electron transport complex RsxE subunit |
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| Protein accession | YP_001473776 |
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| Protein GI | 157375176 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4660] Predicted NADH:ubiquinone oxidoreductase, subunit RnfE |
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| TIGRFAM ID | [TIGR01948] electron transport complex, RnfABCDGE type, E subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAGTG TGCTGAATGA ATACAAGACG ATTGCAATAC AAGGGTTATG GAAAAATAAC
CCTGGTTTAG TGCAACTGCT AGGACTTTGC CCTCTGCTTG CTGTCACGGC GACACTGACC
AATGCTCTGG GGCTAGGCCT TGCGACTATG GCCGTGCTCA TTGGTTCGAA TGTGCTGGTC
TCACTGGTGA AATTTTATGT TCCGCGAGAG ATCCGTATCC CTGTATTTGT CATGATAATC
GCTGCCCTGG TCACCTGTGT GCAACTGCTG ATTAATGCTT ATGCTTACGG CCTATACCTC
TCACTGGGCA TTTTCCTGCC GCTGATCGTC ACCAACTGCG TGATCATTGG ACGTGCCGAG
GCTTTTGCAT CACGCAACTC TTTGCTTAAG TCCGCTTTCG ATGGCTTCAT GATGGGCTTA
GGCTTTCTGC TTGTCCTTGC CGTACTCGGA GCGTCTCGTG AGATCTTAGG GCAAGGGACG
CTATTTGAAG GCGCAGATCT GCTGCTTGGC GATTGGGCGG CCAGCCTCAC GATTCACCTT
TGGCAGGTCG ATACCAACTT CTTGCTCGCC ATGTTACCAC CAGGGGCATT TATCGGTATG
GGCTTCCTGA TAGCATTCAA AAATATTGTC GATAAGCAAA TTGCTGACCG CTCAACGACG
CCCGCTGTAA CCGAAACGGT TACTCGTGCC AGAATAACGA AAGTTAGCTA A
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| Protein sequence | MNSVLNEYKT IAIQGLWKNN PGLVQLLGLC PLLAVTATLT NALGLGLATM AVLIGSNVLV
SLVKFYVPRE IRIPVFVMII AALVTCVQLL INAYAYGLYL SLGIFLPLIV TNCVIIGRAE
AFASRNSLLK SAFDGFMMGL GFLLVLAVLG ASREILGQGT LFEGADLLLG DWAASLTIHL
WQVDTNFLLA MLPPGAFIGM GFLIAFKNIV DKQIADRSTT PAVTETVTRA RITKVS
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