| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2028 |
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| Symbol | |
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| ID | 5613969 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2453706 |
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| End bp | 2454437 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640932914 |
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| Product | putative methyltransferase |
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| Protein accession | YP_001473765 |
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| Protein GI | 157375165 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
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| TIGRFAM ID | [TIGR00740] methyltransferase, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0387258 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACACAT CCCAAGACAC GATATATGCT CAAGCATATG AAAACATAAG CGATTTTCAA
TTCGATGAGA AAGTAGCCGG CGTTTTCAAC GACATGATCC GACGCTCAGT CCCTGGTTAT
GGTCAAATAA TCAACACGCT CGGTGATTTT GCTAACCAAT ATGTCACCAC AGACAGCAAT
ATATATGATC TCGGCTGTTC GCTTGGCGCT GCGACACTCA GTATCCGCAG ACACATAGAT
AATCGTAATT GCAAAATTAT TGCCGTCGAT AACAGTGAGT CGATGATCCA GCGTTGCAGA
GAAAATCTTA GTGCCTATGT TAGTGAAACA CCAGTCGATC TCGTCTGCGG TGACATAAGG
GACATCAAGA TTGAAAACGC CTCTATGGTC GTTCTTAATT TCACGATGCA GTTTCTGGCC
CCTAAAGATA GAGATAGCCT ATTAAGTAAC ATCTATAAAG GACTCAGACC CGGTGGGATC
TTAGTTCTCT CAGAGAAGCT AAACTTTGAA GATGAGTCTA TACAGTCATT ACTGGTGGAT
CTGCACCTGG ATTTCAAAAG GGCCAATGGC TACAGTGAAT TAGAGATCAG CCAAAAACGC
AGTTCTTTAG AGCACGTCAT GAAACCAGAT ACCTTGGAGC AGCATGGAGC TCGTCTAAAA
AAACAAGGCT TCAAACATTT TAACGTGTGG TTTCAATGCT TTAATTTTGC ATCCATGGTT
GCCATTAAGT AA
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| Protein sequence | MNTSQDTIYA QAYENISDFQ FDEKVAGVFN DMIRRSVPGY GQIINTLGDF ANQYVTTDSN
IYDLGCSLGA ATLSIRRHID NRNCKIIAVD NSESMIQRCR ENLSAYVSET PVDLVCGDIR
DIKIENASMV VLNFTMQFLA PKDRDSLLSN IYKGLRPGGI LVLSEKLNFE DESIQSLLVD
LHLDFKRANG YSELEISQKR SSLEHVMKPD TLEQHGARLK KQGFKHFNVW FQCFNFASMV
AIK
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