| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2027 |
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| Symbol | |
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| ID | 5613762 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2452610 |
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| End bp | 2453602 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640932913 |
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| Product | putative methyltransferase |
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| Protein accession | YP_001473764 |
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| Protein GI | 157375164 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2230] Cyclopropane fatty acid synthase and related methyltransferases |
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| TIGRFAM ID | [TIGR00452] methyltransferase, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0258345 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGATCAGTT TCAGCTCCTT CTATAAACAA ATTGCAGATT CCAGCCTACA ACATTGGTTA
GAAACCCTTC CCGCCATTTT AGGGCAATGG CAACGTGAGC ATAAGCATGG CACCCTACCT
AAATGGGAAA AAGTGCTGAA CAAGTTACAT TATCCAACCC CTGATATCAT CGACCTGAAA
AACAGCGTCT CTATTGGTTC CGGACAGCAG CTGGCTAAAG GTGAACGGGA AAAACTCGAA
AACCTATTAC GTATTTTTCA ACCCTGGCGC AAAGGGCCTT TCTCAGTACA TGGTATCGAT
ATCGATACTG AATGGCGCTC AGACTGGAAA TGGGAGCGCA TCCTTCCACA CCTCTCTCCA
TTAAACAATC GCACCGTATT AGATGTGGGT TGTGGCAGTG GCTACCATAT GTGGCGTATG
TTGGGTGAAG GAGCCAAACA TGTCGTAGGC ATCGATCCCT CCACGCTTTT CCTTTGTCAG
TTTGAAGCAA TCAAACGCCT AGCCGGCGAT CACCACCCGG TTCATCTACT ACCATTAGGA
ATCGAAGAGC TTCCGCCACT GGATGCATTC GATACCGTAT TCTCAATGGG GGTCTTGTAC
CACCGTCGCT CACCTATTGA TCATTTGTTA CAACTAAGAG ACCAATTGCG AACAGGTGGT
GAATTAGTTT TAGAGACCTT AGTCATTGAT GGTGATGAAA ATACTGTTCT GGTGCCGGAA
GATAGATATG GCAAGATGAA TAATGTATGG TTTCTTCCTT CGGCAGCCGC ATTAGAACTT
TGGCTAAAAA AAGCAGACTT TATTGATATT AAATGTGTAG ATATCGATGT CACCTCACTG
GCAGAACAGA GAAGCACAGA TTGGATGCCC AATGAGTCAT TAGTCGATTA CCTGGATCCT
ACCAACGTAG ATCTGACCGT CGAAGGTTAT CCGGCGCCTA AACGAGCGAC GTTTATCGCG
ACGAAGAATC AACCCAATAA AGATTTAACT TAA
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| Protein sequence | MISFSSFYKQ IADSSLQHWL ETLPAILGQW QREHKHGTLP KWEKVLNKLH YPTPDIIDLK
NSVSIGSGQQ LAKGEREKLE NLLRIFQPWR KGPFSVHGID IDTEWRSDWK WERILPHLSP
LNNRTVLDVG CGSGYHMWRM LGEGAKHVVG IDPSTLFLCQ FEAIKRLAGD HHPVHLLPLG
IEELPPLDAF DTVFSMGVLY HRRSPIDHLL QLRDQLRTGG ELVLETLVID GDENTVLVPE
DRYGKMNNVW FLPSAAALEL WLKKADFIDI KCVDIDVTSL AEQRSTDWMP NESLVDYLDP
TNVDLTVEGY PAPKRATFIA TKNQPNKDLT
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