| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2026 |
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| Symbol | |
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| ID | 5613761 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2451768 |
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| End bp | 2452511 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640932912 |
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| Product | hypothetical protein |
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| Protein accession | YP_001473763 |
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| Protein GI | 157375163 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4067] Uncharacterized protein conserved in archaea |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0115096 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTAAAGC AGATAATCTG TATTGCCGTG ATTTCAACCT TAGCGGGTTG TGCAGCAACT
AAAACAGCAG AAAATGCACC TCAGCCTATC GATGCTGTGG CTTTAGAGTC TGGTCTGGCG
AAACAACAGG CAGATCTTGT CAACGCAATC GATGAGTCTA AACAAGCTCA AACTACAGGT
TTTACAGCGT TATCTGCGCA AATAAAAGCA CTCGAGACTC AGATTTCGAC GATAAGTATC
GAACCTAAGG AGACCATTGT TCCAGTCCCA ATGGATTGTC CTCCCTCCCC CCTAGGCGGT
AAATTCCTGC TCGGAGCGGA AGAGAATGTC TATATTGACG AGGTTAAAGC TAATTTTAAT
ACCCGTATAG ACACAGGTGC CGAATCATCT TCACTCGACG CACGAAATAT CATCCTTTTC
GAGAGAGATG GAAAACAGTG GGTCCGCTTC GATGTATTCA CCGATGGAGC CGAGGCTCCA
GCGCAAACAT TCGAATCAAA AGTCGAACGT TTTGTACGAA TAAAACAAGA CTCTGATGAA
AAAAGCGATC GCCGTCCGGT TATTCATGCT CACCTGAAGA TAGGAAAGTA TAAAGCCGAA
ACCGATCTAA ACCTGGTTGA TCGCAGTCAC TTAGAATTTC CACTCTTACT CGGTCGTAAA
TTTATGCAAG ACATTGCAGT TGTCGATGTA GGGCAAACCT ATGTTCATGG AAAAAAGAAG
ACGGCCACGG TCGTAAACAA ATAG
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| Protein sequence | MLKQIICIAV ISTLAGCAAT KTAENAPQPI DAVALESGLA KQQADLVNAI DESKQAQTTG
FTALSAQIKA LETQISTISI EPKETIVPVP MDCPPSPLGG KFLLGAEENV YIDEVKANFN
TRIDTGAESS SLDARNIILF ERDGKQWVRF DVFTDGAEAP AQTFESKVER FVRIKQDSDE
KSDRRPVIHA HLKIGKYKAE TDLNLVDRSH LEFPLLLGRK FMQDIAVVDV GQTYVHGKKK
TATVVNK
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