| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2016 |
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| Symbol | |
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| ID | 5614095 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 2441175 |
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| End bp | 2441420 |
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| Gene Length | 246 bp |
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| Protein Length | 81 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640932902 |
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| Product | thiamine biosynthesis protein ThiS |
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| Protein accession | YP_001473753 |
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| Protein GI | 157375153 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2104] Sulfur transfer protein involved in thiamine biosynthesis |
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| TIGRFAM ID | [TIGR01683] thiamine biosynthesis protein ThiS |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.509039 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACCCGA CTAAACCTGT CCTTGAGTCT AAACATGTCA GCACCATCAC TGTCTCTATC
AATGACCTGC CCCATATCAT TCCCGAAACG CTCTCCATAG AGGGGCTTTT ACTGGCGCAA
AACATTGCGA TTAATTCCGT TGCGGTCGTC TGTAATTCCA AGGTCGTGAC GAAAGGGCTG
TGGAAAGAGC AAGCATGTGT CGAAGGCGAT AGCTTTGAAG TCTTTGCCGT AGTGGCAGGA
GGTTAG
|
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| Protein sequence | MNPTKPVLES KHVSTITVSI NDLPHIIPET LSIEGLLLAQ NIAINSVAVV CNSKVVTKGL
WKEQACVEGD SFEVFAVVAG G
|
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