| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2015 |
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| Symbol | |
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| ID | 5614094 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 2440310 |
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| End bp | 2441188 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640932901 |
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| Product | UBA/ThiF-type NAD/FAD binding protein |
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| Protein accession | YP_001473752 |
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| Protein GI | 157375152 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0476] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.57139 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGATT TAGATTTTAT CCGATATTCC AGGCAGATCC TGCTCGATGA GGTGGGGGAG
TCGGGTCAGG CTTCACTATT GGTACGTCAT GTTGTTGTCA TCGGAGTGGG TGGATTAGGC
TCGCTGGTGA GTCAACAGCT CGCGGCCGCC GGTGTAGGCA GGTTGACCTT AGTTGATCAT
GACTGCGTCG AATTATCTAA TCTACCCAGA CAACTCTTGT TTAATGAGAG TGACATCGGC
AAGAATAAAG CGATTACGGC GAGAGATAAG CTGGCTTTGG CGTACAGCCA ATGCAAAATC
GAGTCGGTCA CCGATAAATT TGGTCCAGAC AATGGTGCAT CTTTAGTAAA AATGGCCGAT
ATGGTCATAG ATTGCACCGA TAATTTTATC TCTCGTCAGC AAGTGAACAG ATATTGCGTC
GAAGCGCTAC GTCCCTTAGT CACGGCTTCT GTGGCACATT TTCACGGCCA GATATTCACG
GTCGATACGA ACTCTGCGCC CGAGTCCGGC TGTTATCACT GTCTGTTTCC TGATGATTCA
CAGGTATCAG AAACTTGCCG CAACGTGGGA GTACTAGGCC CTATGGTTGG GGTCATGGCC
TCTATGCAGG CATTAATGGC CATCAATTAC CTGCTCGGTA TCGTGCAATG TTCAGGAAAG
TTGATGAGAT TTGATGGTTT AAATCTTAAG TGGAGAGAGG CCTCATTGAG CCGAGACCCA
CTGTGCCATG TCTGTAGTCT GGAAGATAAC GGTTCAAGTC GCCACCAACC TAGTCATGAA
CACTCTTGTC ATGACCTGTC TCGTAATAAT CAGCCTTTTA ATGACCAATC TTGTAGTAAA
CAGCCTTTTA ATGAGGAGTC TTGTCATGAA CCCGACTAA
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| Protein sequence | MNDLDFIRYS RQILLDEVGE SGQASLLVRH VVVIGVGGLG SLVSQQLAAA GVGRLTLVDH
DCVELSNLPR QLLFNESDIG KNKAITARDK LALAYSQCKI ESVTDKFGPD NGASLVKMAD
MVIDCTDNFI SRQQVNRYCV EALRPLVTAS VAHFHGQIFT VDTNSAPESG CYHCLFPDDS
QVSETCRNVG VLGPMVGVMA SMQALMAINY LLGIVQCSGK LMRFDGLNLK WREASLSRDP
LCHVCSLEDN GSSRHQPSHE HSCHDLSRNN QPFNDQSCSK QPFNEESCHE PD
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