| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2008 |
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| Symbol | |
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| ID | 5612154 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 2429089 |
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| End bp | 2429613 |
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| Gene Length | 525 bp |
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| Protein Length | 174 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640932894 |
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| Product | DTW domain-containing protein |
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| Protein accession | YP_001473745 |
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| Protein GI | 157375145 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3148] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0597525 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00247146 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATGTGA TCCTGTTAAC CCATGAAAGA GAAGTCGAAC GCCTAACCAA TACCGGCGCC
TTGGCACTGA GGGCCTATCC TCAGTGGTGT CGCCGAATTA TCTGGTCTCG GGTTCGTACC
GATAAAGCGT TATTGCAGAT CCTGCATCAA CCCGGTGCGG CGGTCCTGTA TCCGGCTGTG
ACTATAGAGG CTCCTGTTGA CGGGAAAAGT GGCGATACAC AAAGCATTGA GCCACAGCTT
TCAGCTTCAT ACTTGACAGA ACTGCCCGAA ACCTTGGTCA TTATCGATGC GACCTGGCAA
GAGGCCAGAA AAATGCTCCG TCAAAGCCCC TACCTGCAGC AGGCGAATAA ATTTGCGCTT
CCCGAGGTTA ATACTTCTCA GTTCAAATTG CGGCGTAATC AGGTCGACGG AGGCTTGTGT
ACACTGGAGT GCATCATCAG GCTGTGTTCA CTCAAGGGCT TGTGTGCAGA GGCTGAATAT
TTAGAACAAG CGTTTGTGTC GATGAACGAT ACTCATCGCC AGTAA
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| Protein sequence | MNVILLTHER EVERLTNTGA LALRAYPQWC RRIIWSRVRT DKALLQILHQ PGAAVLYPAV
TIEAPVDGKS GDTQSIEPQL SASYLTELPE TLVIIDATWQ EARKMLRQSP YLQQANKFAL
PEVNTSQFKL RRNQVDGGLC TLECIIRLCS LKGLCAEAEY LEQAFVSMND THRQ
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