| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1992 |
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| Symbol | rnhA |
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| ID | 5613370 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2409189 |
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| End bp | 2409659 |
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| Gene Length | 471 bp |
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| Protein Length | 156 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640932876 |
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| Product | ribonuclease H |
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| Protein accession | YP_001473729 |
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| Protein GI | 157375129 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0328] Ribonuclease HI |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000066103 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00000132763 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGATGGGTA TGAAACAGCT CTCTATATTT ACTGATGGCT CCTGCTTAGG TAATCCCGGG
CCTGGTGGCT ATGGTGTGGT GATGAAATAC AAGCAGCACA CCAAAGAGAT CGCTGACGGT
TTCCTGTTAA CAACCAACAA TCGCATGGAA TTATTGGCGC CTATTATTGC ATTAGAAGCA
CTAAAAGTAC CCTGTAAAAT CGTGCTTACC AGTGACAGCC AATATATGCG ACAAGGGATC
ACTCAGTGGA TCCATGGCTG GAAGAAAAAA GGCTGGATCA CCTCGAGTAA GCAACCGGTC
AAAAATGTCG ACCTGTGGAA GCGCTTAGAT CTGGCGAGTA AAGGTCATGA GATTGACTGG
CGCTGGGTTA AGGGTCATGC CGGACATGTC GAAAATGAGC GCTGCGACAC CTTAGCCAGA
GAGGCCGCAG AAGCAAAACC TAAACAAGAA GATATCGGCT ATCAAGCATA A
|
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| Protein sequence | MMGMKQLSIF TDGSCLGNPG PGGYGVVMKY KQHTKEIADG FLLTTNNRME LLAPIIALEA
LKVPCKIVLT SDSQYMRQGI TQWIHGWKKK GWITSSKQPV KNVDLWKRLD LASKGHEIDW
RWVKGHAGHV ENERCDTLAR EAAEAKPKQE DIGYQA
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