| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1971 |
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| Symbol | |
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| ID | 5612249 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2382140 |
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| End bp | 2382952 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640932855 |
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| Product | hypothetical protein |
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| Protein accession | YP_001473708 |
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| Protein GI | 157375108 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2801] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTCAATG TACATCAAAC CAGTATCCGA CTTGCCTGCC GCGTTGTTGG CATCAGTCCA
TCGGTATACC GTTATCAGCC TGATAAGTGC CGGGATGACC CCGTTATTGC CGCACTTCAG
GAGCATGCCG AAAAATACCC GGCATACGGG TTTGGCAAGC TGTTTAAAGT CCTTAGACGC
AAGGGAAAGT CATGGAACCA TAAACGTGTT TACCGTGTGT ATTGCGAGCT TAAATTGAAC
TTCCGTCGCA AGGGCAAGAA ACGCCTGCCG AATCGCAATC CCGCACCGTT AGCGGTTCCT
GAGGCAATGA ATCAATGTTG GTCGATGGAC TTTATGTGTG ACAGTTTACA CTGCGGGCAT
CGCTTCCGAA CGTTTAATGT CATTGATGAT TTTAACCGGG AAATATTGGC TATCGAAGTC
GATTTAAGCC TCCCGGCCCA ACGCGTTATC AGAGTGCTGG AGCGGATTAT TGCCTGGCGT
GGTATGCCAC AAAAGCTGCG GATGGATAAT GGTCCAGAGT TTATCTCACT GGCTTTAGCA
GATTGGGCAG AGCATAACCG AGTTCAACTG GAACACATAA AACCAGGGAA GCCGACACAA
AATTCGTATA TCGAGCGATT TAACCGCACA TATCGAACAG AAATTTTGGA TATGTATTTG
TTTAAAAGTC TCAGGGAAGT ACGTGAAATT ACTGATAACT GGATGAATGA ATATAACGAA
GAGCGGCCAC ATGATTCACT TGGAGATATC ACTTCGTGGG TATATCTGGC GAGCAAGAAA
CAGGGAGGAA ACTCTATTTT TAAGTGGAAC TAA
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| Protein sequence | MLNVHQTSIR LACRVVGISP SVYRYQPDKC RDDPVIAALQ EHAEKYPAYG FGKLFKVLRR
KGKSWNHKRV YRVYCELKLN FRRKGKKRLP NRNPAPLAVP EAMNQCWSMD FMCDSLHCGH
RFRTFNVIDD FNREILAIEV DLSLPAQRVI RVLERIIAWR GMPQKLRMDN GPEFISLALA
DWAEHNRVQL EHIKPGKPTQ NSYIERFNRT YRTEILDMYL FKSLREVREI TDNWMNEYNE
ERPHDSLGDI TSWVYLASKK QGGNSIFKWN
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