| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1957 |
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| Symbol | |
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| ID | 5610597 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 2365659 |
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| End bp | 2366336 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640932841 |
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| Product | nitrate reductase |
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| Protein accession | YP_001473694 |
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| Protein GI | 157375094 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2181] Nitrate reductase gamma subunit |
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| TIGRFAM ID | [TIGR00351] respiratory nitrate reductase, gamma subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.39248 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCAAATT TAAATTTTTT ACTTTTCGGG ATTTATCCCT TTATTGCGAT AACAGTGTTC
TTTGTCGGAT GTTGGATTCG CTATGATCGT GAACCTTATA GCTGGAAAGC CGATTCGAGC
CAGTTATTCG ATCAGAAAGG GTTCCGTCTT GCGAGTAACC TGTTCCATAT CGGAGTTATT
TTCATACTCG CCGGACACTT TGTTGGCTTG CTAACACCAG AGTCTGTCTA TCATCACTTC
ATCTCCAGCC CTAATAAGCA GTTGTTGGCG ATGGTGAGCG GTGGTTTCTT CGGGATTGTC
TGCCTGGTAG GTTTGGTGAT GTTGATTAAA CGTCGTTTAA ACAATGACCG GGTTAAGGCT
AACACCAGAC GTTCAGATAT GGTCGTGCTG TATATGTTGC TGGTTCAGGT CTCTCTGGGC
TTGTTAACTG TCGTTGTATC TATGAGTCAC TTAGACGGCT CTGTAATGGT ACTCTTGGGC
ACCTGGACGC AAAGCATTGC GACTCTTCAG GGAGCACAGG CGGCTGCGGC GATTGAGTCT
GTTAACATCA TTTACAAGTT ACATATCCTG GTTGGTTTAA CCTTGATTAT GATATTCCCG
TTTACTCGCC TGGTTCATGT TATCAGTGTT CCGGTGAAGT ATCTTGCGAG AAACTATCAG
ATCGTTCGCC AACGTTAA
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| Protein sequence | MSNLNFLLFG IYPFIAITVF FVGCWIRYDR EPYSWKADSS QLFDQKGFRL ASNLFHIGVI
FILAGHFVGL LTPESVYHHF ISSPNKQLLA MVSGGFFGIV CLVGLVMLIK RRLNNDRVKA
NTRRSDMVVL YMLLVQVSLG LLTVVVSMSH LDGSVMVLLG TWTQSIATLQ GAQAAAAIES
VNIIYKLHIL VGLTLIMIFP FTRLVHVISV PVKYLARNYQ IVRQR
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