| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1948 |
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| Symbol | |
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| ID | 5611296 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 2349116 |
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| End bp | 2350096 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640932832 |
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| Product | hypothetical protein |
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| Protein accession | YP_001473685 |
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| Protein GI | 157375085 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.270103 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCAGAC CAAGAAGTAC GTTAGTTAGC GTGGAAGACA CTCCTTTCTA CCACTGTATA
TCCAGATGTG TGCGTAAAGC CTGGCTGACG GGAGTCGACA AGTATACGGG TCAGTCATAT
GAACATCGTC GTGATTGGGT TGAAACAAGA CTGCTTGAGT TAGCCGATAC CTTTGCTGTA
GACATTAGTG CTTTTGCGGT GATGTCTAAT CATTTGCACT TGGTTTTGAG GGTGGATATC
TATGAAGCAA ATACTTGGAC TGATAGAGAA GTGGTGGAGC ATTGGCATAG GTTATTTCAA
GGTACAGATA TCACTCAGAA GTTTGCTAAA GGTCAAGTGG TTGAAAAATT TGAAGTTAAC
AGTCTAAAGC ATTCAATTGC TCAATATCGA AGTCGATTAA GTGATATCAG TTGGTTTATG
CGAGCACTTA ACGAACCTAT TGCTCGCATG GCTAATAAAG AAGACAAATG CACAGGTCGT
TTCTGGGAAG GGCGCTTTAA AAGCCAGGCA CTATTGGATG AAGCTGCCGT TTTGGCCTGT
ATGGCTTATG TCGACCTTAA CCCAATTCGT GCCAAGACGG CTGATACTCC AGAGTTATCA
GATCATACAA GTATTCAGCT TAGGATTAAA TCCGCTTTAA ATGGTGAGCA GCCCGATGCT
TTACTCCCAT TTGTAGGAAA TGAACAAAAG GATATGCCCA AAGGGTTAAT GTTCAGCGCC
AAAGATTACC TGCAATTGGT AGATGATACT GGCAGGAGCA TTAGAGATGA CAAGCGAGGT
GCTATAAGCA GCACATCTAT GCGGTTACTC CAAAGACTTA ATATTCCACA AGAAAACTGG
ATAAAACTCA CGACCGATTT CAGTCGATTA TTTAAAGGTC CAGTGGGAAC CTTAGAAGAA
CTTGATGCTT ATTGCGAACA CTTAGAACGT AAGCGAAGGC AAGGGGCTGC AAATTGCCAT
CAATGGCTAG ATAGCGCTTA A
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| Protein sequence | MARPRSTLVS VEDTPFYHCI SRCVRKAWLT GVDKYTGQSY EHRRDWVETR LLELADTFAV
DISAFAVMSN HLHLVLRVDI YEANTWTDRE VVEHWHRLFQ GTDITQKFAK GQVVEKFEVN
SLKHSIAQYR SRLSDISWFM RALNEPIARM ANKEDKCTGR FWEGRFKSQA LLDEAAVLAC
MAYVDLNPIR AKTADTPELS DHTSIQLRIK SALNGEQPDA LLPFVGNEQK DMPKGLMFSA
KDYLQLVDDT GRSIRDDKRG AISSTSMRLL QRLNIPQENW IKLTTDFSRL FKGPVGTLEE
LDAYCEHLER KRRQGAANCH QWLDSA
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