| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1947 |
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| Symbol | |
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| ID | 5611295 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 2347716 |
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| End bp | 2348294 |
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| Gene Length | 579 bp |
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| Protein Length | 192 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 640932831 |
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| Product | nitrate/TMAO reductase |
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| Protein accession | YP_001473684 |
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| Protein GI | 157375084 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG3005] Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.674395 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACAAAA AAAATCTTTA TAATAGAATA TGGGCTAAAT CTAATAACAG CTGGCTATTA
GGTATTCCAT TAGGTGGGTT TATCTTCCTT GCAATAGGCG TATTTATTCT TATTGCGATG
CAGCAAGTTA TTAGTTATAC CAGTACTACA GAGTTTTGCC AATCGTGTCA CATAGGTTCA
GATACGGTTG TTGAAGAATA TCAACAATCA ATTCATTTTA TGAATCGAAC AGGCATTAGA
GCTGAGTGTG TCGATTGTCA TGTACCTGAC TCACTTCTAC CAAAGCTTAT TGCAAAAGTC
AGTACAGGAA CAACACATAT TTGGTCTAAA ATAACTAAAG ATATTAATTT AGACAACTTC
GAATCAGAGC ATAGAGAAAG AATGGCAAAT AATGCGAAAG AAACCATTAG GTCTTTAAAC
AGCTCTACCT GTATGAGCTG CCATGATTTT GATAATATGG ATACAGACAA GCAAGGAAGA
ACAGCAAAAC GTAAACATTC GACTAAACGA AGAAAGGATA AAACTTGTAT TGATTGCCAC
TCAGGAATAG CACATAAGCT ACCCGAAATT GTTTTTTAA
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| Protein sequence | MNKKNLYNRI WAKSNNSWLL GIPLGGFIFL AIGVFILIAM QQVISYTSTT EFCQSCHIGS
DTVVEEYQQS IHFMNRTGIR AECVDCHVPD SLLPKLIAKV STGTTHIWSK ITKDINLDNF
ESEHRERMAN NAKETIRSLN SSTCMSCHDF DNMDTDKQGR TAKRKHSTKR RKDKTCIDCH
SGIAHKLPEI VF
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