| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1944 |
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| Symbol | |
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| ID | 5611372 |
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| Type | |
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| Is gene spliced | No |
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| Is pseudo gene | Yes |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2345485 |
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| End bp | 2346401 |
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| Gene Length | 917 bp |
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| Protein Length | |
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| Translation table | |
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| GC content | 45% |
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| IMG OID | 640744440 |
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| Product | |
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| Protein accession | |
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| Protein GI | |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAAAGT CTAAGCATAA AATAACCAAC TGGTCTCAGT ACAACAAAAC ACTCGTCAAT
CGAGGCTCTT TGACGTTCTG GATTGATGAG CAAGCCATTA AGTCTTGGCG ATGTACCGAA
CACCATGGTC GTCGTGGTCG AGGATATATT TACTCCGACG ATGCTATTGA AACGGCACTG
GTTGTTAAAG GCGTATTCAA CTTGTCACTG CTAGCATTAG AAGGCTTTAC CAACTCTGTA
TTCCAGCTTA TGGATGTGCC ACTGACATCC CCGAGTTACA GCTGTATCAG TAAGCGAGCG
AAGAGTGTTG AAATTAAGTA TCGGACAAAG AGTCATGGTC CTGTGGCGCA TGTAGTGATT
GATTCAACAG GTCTCAAAAT TTACGGTGAA GGTGAATGGA AAACCCGTAA ACATGGCAAA
GAAAAGCGCC GTACCTGGCG TAAGCTACAC CTTGCGGTTG ACAGTAGTAG GCATGAAGTT
GTGTCAGCAG AAGTCACCTT GGTTAAAGTT GCCGATAATG AAGTGTTACC TACATTGCTC
AACCCGTTGA GAAGACGTAT AGCTCAGGTC TCAGCTGATG GTGCATACGA TACCAAGGCA
GGCCATAAGC TACTTCAGCG CAAGGGTTGC AAACCCACTA TTCCACCCAG AAGTAATGCA
GGGAAGAGGG AAGAGGGCAC CCGAGAAATG AAGTAGTAAA AGCGCTCAAG ACAAAGCAAT
TAGCACAATG GAAGCAGGAT AATGCTTACC ACCTAAGATC ACTATCTGAG ACAGCAGTGT
ATCGATATAA GCAATTGGTT AGCCCAAAAC TTAGCCTTCG GGATTACAAC ACGCAGGTAG
GTGAAGCTTT AGCGGGTGTA AAAGCAAGAA ACAAAGTCAT AGAACTAGGT CTGCCAATTA
GGAAACAAGC TGCCTAG
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| Protein sequence | |
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