| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1942 |
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| Symbol | |
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| ID | 5611370 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 2342318 |
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| End bp | 2344330 |
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| Gene Length | 2013 bp |
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| Protein Length | 670 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640932828 |
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| Product | peptidase S15 |
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| Protein accession | YP_001473681 |
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| Protein GI | 157375081 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2936] Predicted acyl esterases |
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| TIGRFAM ID | [TIGR00976] putative hydrolase, CocE/NonD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGTTG TCGAACACTT CACACACAAA ATCCGACAGA TCGAACACTG CTGGATCCCG
ATGGCCGACG GCATTCGTCT GTCTGCCCGT ATCTGGATGC CCGAGGGCGC AGAAACTAAG
CCTGTACCGG CGATTTTTGA ATATATTCCT TATCGTAAGC GTGATGGGTC GAGATTACGC
GACGAAACCA TGCATCCTTA TTTTGCCGGG CACGGCTATG CCTGTATCCG TGTCGATATC
CGTGGTAGCG GCGATTCGGA GGGCGTGCTG ACCGATGAAT ACCTGCAGCA GGAACTCGAC
GACGGTGTAG CCGTTATTGA GTGGCTGGAA AAACAGCCGT GGTGCGACGG AAACGTCGGT
ATGTACGGTA TCTCCTGGGG GGGATTCAAC GGCCTGCAGA TTGCGGCGAT GCAACCGCCA
CAGCTTAAGG CAATCATCAG CGTTTGCTCT ACCGATGACC GTTACGCCGA TGATGTGCAC
TATATGGGAG GCTGCCTGCT GGGTGATAAC CTTTCATGGG CTTCGACTAT GTTTGCCTAC
AACTCCCTGC CGCCGGATCC GCAAATTGTC GGTGATAAGT GGCGCGAGAT GTGGTTTGAG
CGCCTTAAAG GCAGTGGCTT GTGGCTCGAT ACCTGGCTTA ATCATCAGCA CCGTGATGAG
TACTGGCAAC ATGGCTCCAT CTGCGAAGAT TTCTCCAAGG TGCAGACCCC GGTTATGGCG
GTGAGCGGCT GGGCCGATGG ATACAGTAAC GCGGTTTTTC GCCTGATCAG CAATCTGACT
GGTCCGAGGC AGGGGCTGAT TGGCCCGTGG AGTCATAAGT ATCCCCATAT TGGCGTGCCC
GGCCCGGCTA TCGGATTTTT GCAGGAATGC CTGCGTTGGT GGGATAAATG GCTGAAGGGG
ATTGAGACCG GCATTATGGA CGAGCCAATG CTGCGGACAT GGATGCTCGA CAGTATGCCT
CCGTCGACTT TTTACCATCA GCGCTATGGC CACTGGGTCA GTGAGCCCTC CTGGCCGTCA
CCCAATATCG GGACACTTGC CTTCAAGCTT GATAAACATC GTCTGGTCGG CGAGGGCGCA
GAGGTTGAAG AGGAGGAGTT GTGTTTGCAG TCGCCATTGA GTAATGGTCT GTTTGCCGGC
AAATGGTGTT CATATAGCAC GACTCCGGAT CTGCCCCATG ATCAGCGTGA AGAAGAGGGC
GGCGCTTTAA TTTTCACAAC CGATCCTCTC GACACTGCTG TTGAGATCAT GGGGGCCCCG
GTGATCGAGC TGGTATTATC GGCCAGTAAA CCAGTGGCGA TGGTAGCTGT GCGGCTATCT
GATGTGCACC CTGACAACAA GAGCACACGG GTAACTTATG GCCTGCTGAA CTTGACCCAT
AGGGACAGCC ATAGCGAGCC GACACCGCTG GAACCGGACA AGCGCTATCG TGTAAAGCTG
CAGCTTAACG ATGTAGCCCA GATCTTTCCC AAGGGCCATC GGATCCGGAT TGCGGTTTCC
TCGTCATATT TCCCATTGGC CTGGCCTTCT CCTGAGTCGA CGCAGCTCAG GATCTACACA
GGTTGCAGTT GCTTGATATT GCCTACCCGA ACTCCACGCA AAGAGGCTAT CACTTTCCCC
GAAGTAGAGG CTTCAGCCAG CGGTGCCAAG CAGCAGCTTC ATGAGGGGCA TCATAACTGG
CGGGTGATCC GTGAGTTGGA CAAGGATCTG TCGACCTTGG AGGTCATTAA CGACAGTGGT
ACTTACCGGC TTGAAGATAT CGATCTGATT GTAAAGCGCG AGACGAAAGA GTGGTACTCC
TATCAGTGCG ATGACTTCCA GTCCCCGAAG GGCGAGACTC TCTGGCGGTG GGGATTTAAG
CGAGATGACT GGTCGGTAGA GACCGTCACC CGTACCATAC TGCACTGCGA TGAGTCCTAT
TTTTATCTGG ATGCAGAACT CGATGCCTAT GAGGGTGACA AGCGAGTTTA TTCACAAAAC
TGGAACCTTC GCATTAAGCG TAATTTAGTT TGA
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| Protein sequence | MKVVEHFTHK IRQIEHCWIP MADGIRLSAR IWMPEGAETK PVPAIFEYIP YRKRDGSRLR
DETMHPYFAG HGYACIRVDI RGSGDSEGVL TDEYLQQELD DGVAVIEWLE KQPWCDGNVG
MYGISWGGFN GLQIAAMQPP QLKAIISVCS TDDRYADDVH YMGGCLLGDN LSWASTMFAY
NSLPPDPQIV GDKWREMWFE RLKGSGLWLD TWLNHQHRDE YWQHGSICED FSKVQTPVMA
VSGWADGYSN AVFRLISNLT GPRQGLIGPW SHKYPHIGVP GPAIGFLQEC LRWWDKWLKG
IETGIMDEPM LRTWMLDSMP PSTFYHQRYG HWVSEPSWPS PNIGTLAFKL DKHRLVGEGA
EVEEEELCLQ SPLSNGLFAG KWCSYSTTPD LPHDQREEEG GALIFTTDPL DTAVEIMGAP
VIELVLSASK PVAMVAVRLS DVHPDNKSTR VTYGLLNLTH RDSHSEPTPL EPDKRYRVKL
QLNDVAQIFP KGHRIRIAVS SSYFPLAWPS PESTQLRIYT GCSCLILPTR TPRKEAITFP
EVEASASGAK QQLHEGHHNW RVIRELDKDL STLEVINDSG TYRLEDIDLI VKRETKEWYS
YQCDDFQSPK GETLWRWGFK RDDWSVETVT RTILHCDESY FYLDAELDAY EGDKRVYSQN
WNLRIKRNLV
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