| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1931 |
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| Symbol | |
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| ID | 5611261 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2320237 |
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| End bp | 2320578 |
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| Gene Length | 342 bp |
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| Protein Length | 113 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640932817 |
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| Product | hydrogenase nickel incorporation protein |
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| Protein accession | YP_001473670 |
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| Protein GI | 157375070 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0375] Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) |
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| TIGRFAM ID | [TIGR00100] hydrogenase nickel insertion protein HypA |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.350795 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACGAAC TAGGCGTTGT CATTGGAGTC GTTAAAAAAG TCATTCAAGT GGCAGAGAGT
AATCAATTAC AGAGTGTCGA TACCATAGTG CTGCAAATCG GCCAGCTGTC ATCCATGATC
CCCACCTATA TCCAAACCTG CTATCCGGCG GCGGTCGATG GCACAATGCT CGAGAAGACT
AAGTTAGAAA TTGAAATCTT ACCCGCCAAT GCACTCTGTA AAGCTTGCCA TCAGGTGTTT
AATATCATTG AAAATCGTTC ACAATGTCCG CACTGCGACA GTGATGAGTG GGGATTACTC
AGCGGCAAAG AGTTTATCAT CAAAGAGATC ATCGCTCAGT AA
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| Protein sequence | MHELGVVIGV VKKVIQVAES NQLQSVDTIV LQIGQLSSMI PTYIQTCYPA AVDGTMLEKT
KLEIEILPAN ALCKACHQVF NIIENRSQCP HCDSDEWGLL SGKEFIIKEI IAQ
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