| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1925 |
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| Symbol | |
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| ID | 5611216 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 2314499 |
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| End bp | 2315206 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640932811 |
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| Product | purine nucleoside phosphorylase |
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| Protein accession | YP_001473664 |
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| Protein GI | 157375064 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0813] Purine-nucleoside phosphorylase |
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| TIGRFAM ID | [TIGR00107] purine-nucleoside phosphorylase, family 1 (deoD) |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACTCCAC ATATTAATGC AAGCTTAAAT GATATTGCAG AAATCGTACT CATGCCGGGC
GATCCCCTGC GGGCTAAGTA TATAGCAGAG AACTATTTAG AAGATGCCAG GCTAGTGAGC
GATGTAAGAA ACATGTTCGC TTTCACCGGC TTCTATAAAG GCGTTAGGAT CAGTGTGATG
GGCCATGGCA TGGGGATCCC ATCCGTCTCT ATCTATGCTC ATGAATTGAT CCATGAATAT
GGCGCTAAGA AGCTTATCAG GGTAGGGAGC TGCGGTGGGG TGGCCGAAGA TATTAACCTC
AGGGATATTA TTGTCGTTAA TGCAGCTTCT ACCGGTTCCG GGACCAATAG GGCAAGGTTT
GCCGGTTATG ATTACGCCTC GGTTCCCGAT TTTGAGATGT TAAAAAACTG CTGGCAAACT
GCCGACGAGC TCCAAACTAA AGTGAGAGTC GGTGGTATTT TTACTAACGA CTTCTTTTAT
GGTGATCCAG ATAATCTGCT TCCGGCTTTA CAGAAAATGA ATATTTTGGC GATGGACATG
GAATCTGCGG CACTCTTTGC CATTGCTGCA GAGAGCCGTG TGCAGGCTCT GAGTATCATT
ACAGTCTCTG ATCATGTCGT CAAAGGCGGT GAGATGAGTG TGCTTGAGAG GCAGACAACC
TTCGATCAGA TGATGGTATT GGCACTTGAA ACGGCGATAA GGGATTGA
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| Protein sequence | MTPHINASLN DIAEIVLMPG DPLRAKYIAE NYLEDARLVS DVRNMFAFTG FYKGVRISVM
GHGMGIPSVS IYAHELIHEY GAKKLIRVGS CGGVAEDINL RDIIVVNAAS TGSGTNRARF
AGYDYASVPD FEMLKNCWQT ADELQTKVRV GGIFTNDFFY GDPDNLLPAL QKMNILAMDM
ESAALFAIAA ESRVQALSII TVSDHVVKGG EMSVLERQTT FDQMMVLALE TAIRD
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