| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1921 |
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| Symbol | |
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| ID | 5612909 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 2310695 |
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| End bp | 2311162 |
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| Gene Length | 468 bp |
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| Protein Length | 155 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640932807 |
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| Product | MarR family transcriptional regulator |
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| Protein accession | YP_001473660 |
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| Protein GI | 157375060 |
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| COG category | [K] Transcription |
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| COG ID | [COG1846] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.153298 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGTTGATG ATATAAAAAT TCTTAAGGAA TTATCTCTTG CCGAGCAGTT GAGGCGGGTC
GCTCGCTTAT GGCGAAATGT AGCCGATAAG GAATTGGCTC CGTTAGGGCT CACTCATCCG
CGGTGGACGG CACTGTGGAA ATTGCAAAAT CTCAATGACA ACGTGAGTCA AAAGGCGTTG
GCAAAAGCCC TGGAAATCGA ACTGGCATCC TTGATGCGCA CGCTAAGTCA ATTAGAGGAT
CAAAACCTGA TCGTTCGTTA CAGCAGTGAA ACAGATAAGC GTGTGCGAAT TGTCAGCCTG
ACCGATGAAG GTAAGGCCAT GATCACAAAG GTGGAAGCGC GTATTTTACA GATCCGCCGA
GATTTGATGA CTGGGATCAG TGAAGAGGAA CTGAACCAAT TTAAACGTAC CGTCGAGCTT
ATTGCCCAAA ACGCGTTAGC ACAACTAAAC GAAAGTGAAC AAGACTAA
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| Protein sequence | MVDDIKILKE LSLAEQLRRV ARLWRNVADK ELAPLGLTHP RWTALWKLQN LNDNVSQKAL
AKALEIELAS LMRTLSQLED QNLIVRYSSE TDKRVRIVSL TDEGKAMITK VEARILQIRR
DLMTGISEEE LNQFKRTVEL IAQNALAQLN ESEQD
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