| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1895 |
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| Symbol | |
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| ID | 5613837 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 2281126 |
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| End bp | 2281893 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640932781 |
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| Product | hypothetical protein |
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| Protein accession | YP_001473634 |
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| Protein GI | 157375034 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.498275 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.000366813 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGAAAAATT CCACTGAACA AGAACTCGTT ACACCACTTT CTACTTTTAC GGTCTCGGCA
AGAGGTAAGA ACCGACTGGA GCCAATCGGC AACTTTCTTA AGACAAACTT CGCTTCACTT
CCCCTGAGTC AGGTTGAGAG TATTTTTGGT TTTGTCGAGC GTTCGACCCT GTATGGTGGC
CGGGCCTTTC AACAACGACA ACTATCCAAT AGCGATGTAT TACAACTCAA TGAGTGGGGG
ATTGGGGTCA GGATCCCGAT GACAAATCAC TTTGCTACCC GCGATGAATT TCAGCAAAAC
AGTCGCATCT TGCAGAAGTA CCATAACCCG CTTAACTCCA TTATCTGCAC CAATGATGAC
CTGGCTCAAT GGATCCGAAA CGACTTTCCT GATTATGATA TCGAAGCCAG TGTGATTAAA
AATATCACCA CCTCCAGCCA GATTGAAGAT GCGTTATCTA TCTACACGAC GGTCGTCTTG
CCTATGGTTG CAAACGATGA CGATGCCCTG TTAGACAGTA TCGAAGATAA GAGCCGGATT
AGGTTGTTTG CCAATGCCGG ATGCGCCTAT ACCTGTCCCG CCAGGATCTG CTATAAATCT
TTCTCAAAGA TGAATAAGTT TACCGGGGAT GAGTTTAAGT GCTCACAGCC GATAAAGGCT
CGGACAAGTA AAGGCATGAT TGATTTTGAC CTGCAGCGCC TGCGCGATAA AGGTTTCCAT
AAATTCAAGC TGCTACGTGC TCAGGTAGGT AATCAAACCG GTTATTAG
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| Protein sequence | MKNSTEQELV TPLSTFTVSA RGKNRLEPIG NFLKTNFASL PLSQVESIFG FVERSTLYGG
RAFQQRQLSN SDVLQLNEWG IGVRIPMTNH FATRDEFQQN SRILQKYHNP LNSIICTNDD
LAQWIRNDFP DYDIEASVIK NITTSSQIED ALSIYTTVVL PMVANDDDAL LDSIEDKSRI
RLFANAGCAY TCPARICYKS FSKMNKFTGD EFKCSQPIKA RTSKGMIDFD LQRLRDKGFH
KFKLLRAQVG NQTGY
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