| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1894 |
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| Symbol | |
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| ID | 5613836 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 2279633 |
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| End bp | 2280844 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640932780 |
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| Product | permease |
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| Protein accession | YP_001473633 |
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| Protein GI | 157375033 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2807] Cyanate permease |
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| TIGRFAM ID | [TIGR00896] cyanate transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.000171922 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAAGAA GTACTCAAAC CGGATTATTG GTTGCCGGAA TATTACTGTT TGCGGCAAAT
TTGCGTGCGC CTATCACGGG CGTAGCCCCT CTTTTATCCA TGATCTCCGA GAGTCTCCAA
TTATCAACAA TGCAAGCGGG TTTACTGACA ACCTTGCCGC TATTGGCTTT CGCGATAGTG
TCACCCATAG CCTCATACCT GGCCAAAGAG TATGGTTTAG AGCCTTCGAT TATGGGGGCG
TTAAGCGTCA TTGCCTTGGG GATCCTGATC CGTTCATCGG GGAGTGTCTC GGCACTCTAT
CTGGGGACTG TGATTATCGG CTGTGGGATC GCTATTGGAA ATGTGTTGTT ACCCAGTTTG
TTAAAGCGTA ATTTCCCTGC TCGTATTGCA ACATTCACAG CGGTTTATGC GTTAACTATG
GGAATAGGCT CCGCCATCAG CTCTGCCGTT GCCGTCCCCC TGGCAGAATT TGATGGTAAC
GGTTGGGCTC TTTCGATGGG AAGTTTCATC GTGATCCCAC TGCTTTCGAT GGCAGTTTGG
CTACCACAGA TGAGAAATGA CACACAACCG ACCGAAGATA CCCGGGGCCT TCCCCATGGT
GGAAAAGTTT GGCGTTCGCC ATTGGCGTGG CAGGTGACCT TTTTTCTCGG TTTAAATTCA
TTTATCTCCT ACATCATAAT CGGTTGGCTA CCGACTATTC TTATCGATGC CGGTTACTCG
GCTTCACAGG CGGGGGCAAT GCATGGATTG CTGCAGCTAT CTACCGCGAT ACCCGGGTTA
TTGCTTATTC CTCTATTGGC AAGAATGAAA GATCAACGCG GATTAGCATT CGGTGTATCA
GTTGCTTCCA TGCTAGGTAT TCTGGGCTTA CTCTATTTCC CAGAACTCGC GATGCTGTGG
ACTCTTATAT TCGGATTCGG TGCAGGTGCG GGCTTAATTC TTGGCTTGTC TTTTATCAGT
TTACGCACGG ATAGTCCACA TCAGGCTGCG GCGCTATCGG GTATGTCTCA GAGTGTCGGT
TATCTGTTGG CGGCAATGGG GCCAGCCTTG GTGGGTTCTA TCTACAGTGC GACAAACAGC
TGGGTGACAC CTCTTGTACT ATGTGCATCC GGTTGCGGAC TCTGCGCCGT GTTCGGTTTG
TTTGCCGGAA GAGGTTTAAC GATTAATGCT CAGCAAAGCG CCGAGAGTGA TAAGGTGGTT
CTGGTTAGTT AA
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| Protein sequence | MKRSTQTGLL VAGILLFAAN LRAPITGVAP LLSMISESLQ LSTMQAGLLT TLPLLAFAIV
SPIASYLAKE YGLEPSIMGA LSVIALGILI RSSGSVSALY LGTVIIGCGI AIGNVLLPSL
LKRNFPARIA TFTAVYALTM GIGSAISSAV AVPLAEFDGN GWALSMGSFI VIPLLSMAVW
LPQMRNDTQP TEDTRGLPHG GKVWRSPLAW QVTFFLGLNS FISYIIIGWL PTILIDAGYS
ASQAGAMHGL LQLSTAIPGL LLIPLLARMK DQRGLAFGVS VASMLGILGL LYFPELAMLW
TLIFGFGAGA GLILGLSFIS LRTDSPHQAA ALSGMSQSVG YLLAAMGPAL VGSIYSATNS
WVTPLVLCAS GCGLCAVFGL FAGRGLTINA QQSAESDKVV LVS
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