| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1892 |
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| Symbol | |
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| ID | 5611077 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 2277854 |
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| End bp | 2278606 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640932778 |
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| Product | hypothetical protein |
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| Protein accession | YP_001473631 |
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| Protein GI | 157375031 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0327] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00486] dinuclear metal center protein, YbgI/SA1388 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.339977 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0000115783 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACACGTA CAGAGCTAAG CCGATATCTT TCAGAGTTTC TTCAGATTTC CAACTATAAA
GACTATGCCC CCAATGGATT ACAAGTGGAA GGACGTTCAA AGATTGCCAC TATAGTCACA
GGGGTAACGG CTTGCCAGGC ATTGATCGAC CGAGCCATAG CGTTAAATGC CGATGCGATT
CTCGTACATC ATGGTTTCTT CTGGAAAGGG GAGCCTGAAG TCATCACGGG AATGAAGCAG
CGTAGGGTCA AGGCACTACT AGCCCATGAT ATCAATCTGT TCGGTTACCA TCTGCCACTG
GACGGTCACC CTATGTTAGG CAATAACGCA GAGCTCGGCC GTAGACTCGA TATCTCGGAT
GCAGAGCCGG TAGAGGACGT TGCTCAGGGA CTTATTTGGC AGGGGCGGCT TGATACGCCT
ATGTCTGTCG AGGCTTTCTC CGCTCGATTA AACCATGTAT TAAACAGAGA AGCGCAGCAT
ATTGGCCAGA GCAATGATGA AATCAAATCC ATCGCCTGGT GCAGTGGTGG CGCTCAGGAT
TATATCGATA TCGCCGCCGA TCTCGGTGTC GATGCCTTTA TCAGTGGTGA AGTATCGGAG
CGAACCTTCC ACAGTGCCAT GGAATTAGGT GTCCACTATT TCGCCGCCGG GCACCATGCG
ACCGAGCGTT ATGGGATACA GGCCCTGGGT GAGCATTTAG CGAGAGAGTT TAATCTAGAA
CATCACTTTG TCGACATTAA TAACCCTGTG TAA
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| Protein sequence | MTRTELSRYL SEFLQISNYK DYAPNGLQVE GRSKIATIVT GVTACQALID RAIALNADAI
LVHHGFFWKG EPEVITGMKQ RRVKALLAHD INLFGYHLPL DGHPMLGNNA ELGRRLDISD
AEPVEDVAQG LIWQGRLDTP MSVEAFSARL NHVLNREAQH IGQSNDEIKS IAWCSGGAQD
YIDIAADLGV DAFISGEVSE RTFHSAMELG VHYFAAGHHA TERYGIQALG EHLAREFNLE
HHFVDINNPV
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