| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1888 |
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| Symbol | |
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| ID | 5610988 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2274880 |
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| End bp | 2275590 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640932774 |
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| Product | arginyl-tRNA-protein transferase |
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| Protein accession | YP_001473627 |
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| Protein GI | 157375027 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG2935] Putative arginyl-tRNA:protein arginylyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000499329 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.000014618 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGAGCTTTA AATCACAGCC TATATCGGTC GGAATAACGA AAACCTTTCC CTGCAGCTAT
ATCGAAACAG AGTTAGAACA GTTATTGGTC CTTCAGGAGG ACAATATCGG GTTGGCACTA
TTCGAGCAAC TCTTAGCGCT AGGTTTCAGG CGTAGCGGCG GTACCATCTA TAAGCCCCAA
TGTCCACATT GTAACGCCTG TCTGCCAATT AGGATCCCCT CCTTTTTATT CACGGCTTCA
AGAAGGCAAA AAAGAACCCT GAAGAATAAC CAGGATCTCA TTTGGAAAAT TGTCGAAAAG
CAAGCCGAGC ACCATTATGA ACTTTACGAG ACTTACATCA ATGTAAGACA CAAAGATGGT
CCTATGTACC CCGCTTCGAG GGAACAGTAT AATCATTTTA TCGATTCAGG CTGGCTCGAT
CCCATATTTA TTGAACTGTG GAATAACGAT AGACTCATCG GCGTTGCCGT TACCGATATA
CTGCCAAACA GTTTATCGGC CATCTACAGC TTTTTTGCTC CCGATGAACA TAAACGCTCC
TTGGGTTCAC TACTGATTTT GATCCAATGC CGCCTGGCAA AACTCATGCA CAAAGAGTTC
ATCTACCTTG GATATCAGAT CGATGAATCC AGAAAGATGA ACTATAAACG AGACTATATG
CCATATCAGA TTTTAACTTC ATCCGGTTGG CAGCAAACTC CTGAAGAATA A
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| Protein sequence | MSFKSQPISV GITKTFPCSY IETELEQLLV LQEDNIGLAL FEQLLALGFR RSGGTIYKPQ
CPHCNACLPI RIPSFLFTAS RRQKRTLKNN QDLIWKIVEK QAEHHYELYE TYINVRHKDG
PMYPASREQY NHFIDSGWLD PIFIELWNND RLIGVAVTDI LPNSLSAIYS FFAPDEHKRS
LGSLLILIQC RLAKLMHKEF IYLGYQIDES RKMNYKRDYM PYQILTSSGW QQTPEE
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