| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1887 |
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| Symbol | infA |
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| ID | 5610987 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2274522 |
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| End bp | 2274740 |
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| Gene Length | 219 bp |
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| Protein Length | 72 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640932773 |
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| Product | translation initiation factor IF-1 |
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| Protein accession | YP_001473626 |
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| Protein GI | 157375026 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0361] Translation initiation factor 1 (IF-1) |
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| TIGRFAM ID | [TIGR00008] translation initiation factor IF-1 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000185401 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0000121311 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGCGAAAG AAGACAACAT TGAGATGCAA GGCACGATCC TTGAAACCTT GCCGAACACA
ATGTTTCGTG TAGAGCTAGA GAACGGTCAC GTTGTGATTG CACACATCTC AGGCAAAATG
CGCAAAAACT ACATTAGAAT TTTGACCGGT GATAAGGTCA CAGTTCAGCT GACCCCTTAC
GATTTGAGCA AAGGTCGCAT CGTCTTCCGT TCACGCTAA
|
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| Protein sequence | MAKEDNIEMQ GTILETLPNT MFRVELENGH VVIAHISGKM RKNYIRILTG DKVTVQLTPY
DLSKGRIVFR SR
|
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